Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0432 ATGGGCCGGCGAAAGAGCAACAATAATCAGTGTTCCTCTAGCAAGGAAGACACCACCATGAGTAACCACCTTCGCTTTGAGGATGCCGAGGAGGCTGTCGAAGAGAGTTCCAACCTCGACCAATCCATGTGTGACATCGATGAATCCGATGATAAAACCAGTGCCGACTACTATTTTGATTCCTACTCCCATTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTGAGAACTAAGACATATCAAAATGTTATTTACCAGAATAAGTTTCTATTCAAGAATAAAGTAGTTCTTGATGTTGGAGCTGGAACTGGGATTTTATCACTATTTTGTGCCAAAGCGGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCAAAGGAGATTGTTGAAACTAATGGTTTCTCTAATGTTGTGACTGTTCTGAAGGGGAAGATTGAAGAAATTGAGCTTCCAGTTCCTAAAGTTGATATAATAATTTCAGAATGGATGGGATATTTCCTGTTGTTTGAAAACATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCGGATGATGGAGTTGTGTTACCTGATAGAGCATCCCTTCATCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTAACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCGCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAATTGCCAACTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCCCTTGTTGCATACTTTGATGTGTCGTTCACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCGAAATCACGAACTACACATTGGAAACAAACAGTCCTATATCTGGAAGACATCTTGACCATTTGTGAGGGGGAGGCAATTGTAGGGAGCATGACTGTTGCACCAAATAAAAAGAATCCCCGCGATGTTGATATAATGGTTAAGTATTCATTGAATGGAAAGCGATGCAATGTTTCAAGGGTTCAGTACTACAAGATGCGTTGA 1131 0.4103 MGRRKSNNNQCSSSKEDTTMSNHLRFEDAEEAVEESSNLDQSMCDIDESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGFSNVVTVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGVVLPDRASLHLTAIEDADYKEDKIEFWNNVYGFNMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPKSRTTHWKQTVLYLEDILTICEGEAIVGSMTVAPNKKNPRDVDIMVKYSLNGKRCNVSRVQYYKMR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0432 376 CDD AdoMet_MTases 97 197 - -
Vra1g0432 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 356 IPR025799 GO:0016274|GO:0018216
Vra1g0432 376 Gene3D - 200 376 - -
Vra1g0432 376 MobiDBLite consensus disorder prediction 1 45 - -
Vra1g0432 376 MobiDBLite consensus disorder prediction 1 19 - -
Vra1g0432 376 Gene3D Vaccinia Virus protein VP39 46 198 IPR029063 -
Vra1g0432 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 35 376 IPR025799 GO:0016274|GO:0018216
Vra1g0432 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 375 IPR029063 -
Vra1g0432 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 166 - -
Vra1g0432 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 35 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0432 Vra-Chr1 5408062 5411718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0432 6 339 C2H2 Transcription Factor Family AT3G12270 36.740 1.85e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0432 K11434 - gmx:100781777 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0432 1 5408062 5411718 Vra1g0432 1 5408062 5411718 ECH