Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0383 ATGAGGTGGTGCAGAGAGGTGTTCTCTGTGCGTGGGTCTGGGTCGGGTGCTCATGCCATTGCGCTGTCACTCGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTCTCCTTTCAAATTCAAACTCACTGACTCATCTTCACTTTCTCTCACCCATCGTAAGCAGCTCCTACCCGCTGCACTGTCACTAACACAGCCCTCTACTGCAAGGGAGGACGATTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCTTCAAACACCGTTCTTTCTTGGAATTGGAGGACCTCGACATCAATGGAAGAGTCTATGTGAATGAACAAGGGATTAATGCCCAGTATAGTGGACCATCAAAAGATGCTCTGGCGTATGTCAACTGGTTAAGACAGGATAACAGGTTTTCTGACATATTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTAAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCAATGCGTGCAATACCTTTATCACCAGCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAGAGCAAAAGATTATCATGACAGAGATTTCATTCTATTGGATGTCAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGACTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCTTTTGGTCTTTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAACGTGGATAAAGAAAAGACAAACATATTGATGTATTGCACTGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGAGGCAGGGATTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGGGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTTTACTATACTGGGGCCACAACCAAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAAATGCCATGTATGTAATTTGGAAGTGAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAATGA 1317 0.4184 MRWCREVFSVRGSGSGAHAIALSLAPIVTASFCSKSLVLPFQNSPFKFKLTDSSSLSLTHRKQLLPAALSLTQPSTAREDDFDFVVVNFYHFVFIQDPQAEVFKHRSFLELEDLDINGRVYVNEQGINAQYSGPSKDALAYVNWLRQDNRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIPLSPAEWKERLEAVNKTDLRAKDYHDRDFILLDVRNGYEWDIGHFRGTQRPSVDCFRNTSFGLSQEEITASDPLSNVDKEKTNILMYCTGGIRCDVYSTILRRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYYTGATTKAELTPVSGDDKFAKCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHNYRDMDLPEQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0383 438 CDD RHOD_YceA 200 319 - -
Vra1g0383 438 Pfam UPF0176 acylphosphatase like domain 85 176 IPR040503 -
Vra1g0383 438 Gene3D - 73 179 - -
Vra1g0383 438 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 188 337 IPR036873 -
Vra1g0383 438 Pfam Rhodanase C-terminal 328 409 IPR022111 -
Vra1g0383 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 78 435 IPR020936 -
Vra1g0383 438 ProSiteProfiles Rhodanese domain profile. 223 326 IPR001763 -
Vra1g0383 438 Gene3D - 193 351 IPR036873 -
Vra1g0383 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 78 435 - -
Vra1g0383 438 SMART rhod_4 201 323 IPR001763 -
Vra1g0383 438 Pfam Rhodanese-like domain 221 318 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0383 83 434 Sulfurtransferasese or Rhodanese AT1G17850 67.582 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0383 - - gmx:100814358 761.525