Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0379 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTGGATGACCTCCGCCTCAGGAAACAACGAATGGCTTCGTCTCAAACTTCACACCAATCCCACCATTTTCCCATAGATGCATATGCTTACACAAAACAAGCATATAGAGGATCCAGACATGCAAAAGCTAATGAGATTGTGACTTCCAGAACTGGGGTGACGCTGAATAGCTCAAATAGAAGCCACAGATCGGTAAACAATGGGCAAGTTTCAAACCAGATGGTCCCATATGGGAAAGGTCAGAAGAGCTCAAGACTAACTGGTGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAGATTAACAGAGGAACATTGGAATTCAGCGTGTCAGAAAGACAATTAGCTTCGACTAGCAACTATCCTATCCAAATAAACGAGATATCCAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGCACCAATGGCCTTAACATGGACACATATTCAATACAATTTGCAAAGGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCAACTTTCTCTTTTGACAAACATACTACTCAGAACACCCAACAACTTGGAAAGGCTACTTTCATGCAGAGACCAATTACTCTTACAAGCTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGAAGAAACAAGTTTCTCAGAAGCGATCAACTAAACCTAGCTCTATCTCTACCTCTGGCATTAAGAATGTCAATGCTAATTCAGAAGGGAAAAATCAGACGCCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAAACTAATGGGGCTGGACATCCTTCCTGACAGAGTGGAAATGGATTCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCAAAAGGAAGCACTAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCTATAAAAGAGCAAAAAGACATAGAAGCTTTCAAAACTCCTGCAACAAAGGGTGAAGAGATGATATCGGGGGTAAATAAAAGTTTTCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAAAACAACTGTTGAGAGACCAGGATGGAATAAAAGCACTGAAAGAATTTGACAAGCAGACTAAAGGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATTATGTTCAGGGGATAATAAAAAAAAAGGATCATCCAAATAACAATAAAAGGGAACAGAAAGGCACTATAAGGGGCAGAACCGACGATCCAGTTCTTAACAATATGATATCCCAGCTAGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGACTCAGCCAGAAAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAGGCACACAAACAAGAACATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAGAAGACACATGTAGTCTCCAAAAATGGGCTTCATGAAGAAAAGCATCGCAGAGAACAACAACTCCAGGTTAGGGAAGAACAAATGCTGATAATGAGACCACAAGGAGGGAGTGAAATCACCTCAAAGAATTCACCAAAATCCCCTCCTTCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACTCCGGAGAAAAAAATGTAGCTGCTATGAAATCGGAAGGCCTTTTAACAAATCATTATGATCTAGTCAGAGATGAAGCATCCAATTATACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCTAGAGATCAAGAATATGAACGAGCTAAGCGAAGTGGCCTTAGAACTTTGATGGATGAAAAACACGTCTATAAGCTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGCGATTGGGAAGATTGATCAAGTGTTGACTGGAAGAAAGGGAGCAAGGCTTATCACTAAACCAGGAAAACAGCAGATTCCCACTTCTGACAAATTCGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACAGATGCACACATCATTAGCCCCAGTGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCGCCAACCCCATAAAGAATCTGAACTACCGCCTACATTCTCCAGTTCTGTTGGTGGAGAACTTCAAAGCCAACAAGATTTGGTAGCAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAGGTTGCATTACAGAAAACAAATGGAATTCTGGAAGACAAATTTCGTCTTAAGCACTCAAACCTAGAAGATCAGAATATTTCTGAAAAAAGCTTCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAAGGTGGTGGTCGGGAGATTCAAGACGAAGGCAGCAAACTTATATTAGATTGTGGATATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAAAAGAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGACGAGTTAGTTAGGCAGCTGAATAAAGACACGGAGAAGCTCAAGTTCTACGGTAGGAAAACAAGTTGCCTAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGACAAAGATCCAGACGTGAACTGCATGTGGGATTTAGGATGGAATGATGAGACAGTTGCATTTATAGAGAAATACGATGTTATAAGGGATACGGAAAAGAATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGAATTTTGCACGTTCAATCATACACCGAAACAGTAG 3129 0.4056 MAKRSDFAQKLLDDLRLRKQRMASSQTSHQSHHFPIDAYAYTKQAYRGSRHAKANEIVTSRTGVTLNSSNRSHRSVNNGQVSNQMVPYGKGQKSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSVSERQLASTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDKHTTQNTQQLGKATFMQRPITLTSSKEDSNSNNENKTVKKQVSQKRSTKPSSISTSGIKNVNANSEGKNQTPSNPEKGRIPNVIAKLMGLDILPDRVEMDSKHVMLQKREGISPKHTAKGSTKKTELQRKETDNLVPIKEQKDIEAFKTPATKGEEMISGVNKSFLVEKTSSELSLQNGKQLLRDQDGIKALKEFDKQTKGSAEKNLTRDGQNYVQGIIKKKDHPNNNKREQKGTIRGRTDDPVLNNMISQLEQVKERSEVKPSTQPEKVVNANNVQPEKRHTNKNITNNEKKSRNNNGIQKTHVVSKNGLHEEKHRREQQLQVREEQMLIMRPQGGSEITSKNSPKSPPSQKKQLSMNQGFKKNSGEKNVAAMKSEGLLTNHYDLVRDEASNYTNEKVKEIVHRKSGQISSPRDQEYERAKRSGLRTLMDEKHVYKLASKKIKNTKKQNVDAIGKIDQVLTGRKGARLITKPGKQQIPTSDKFEVLNEAEQERISLFRETDAHIISPSEQVYVDATEPLDVKRQPHKESELPPTFSSSVGGELQSQQDLVATVPSDLHCQDVLSLQDPVAADERFVTGEVALQKTNGILEDKFRLKHSNLEDQNISEKSFQQPLTESENCLKWILVMSQLFVNTAEGLFKLNIPFNVLQGGGREIQDEGSKLILDCGYEVMKRKGIRQELKRVHSYSRISMGTTNIISFDELVRQLNKDTEKLKFYGRKTSCLVDVEDYLPKMLEHDVYDKDPDVNCMWDLGWNDETVAFIEKYDVIRDTEKNILSVLLDEITLEFCTFNHTPKQ* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0379 1042 MobiDBLite consensus disorder prediction 580 614 - -
Vra1g0379 1042 PANTHER EXPRESSED PROTEIN 1 1034 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 581 612 - -
Vra1g0379 1042 Pfam DUF761-associated sequence motif 325 341 IPR032795 -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 465 490 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 269 327 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 522 544 - -
Vra1g0379 1042 PANTHER OS01G0228800 PROTEIN-RELATED 1 1034 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 269 323 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 468 484 - -
Vra1g0379 1042 MobiDBLite consensus disorder prediction 66 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0379 Vra-Chr1 4980086 4986203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0379 1 386 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 37.871 1.36e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0379 - - pvu:PHAVU_002G333000g 1716.82