LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra1g0368	ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCGTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACAGCACCTTTATATGTATTTGGGACAATGCGAACGAGCGATCTTGCAGCAGATCAGGAAGTTGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACCATAATTTCCTTCCTGAAGTATGCCTCCATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCACTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACACAAGTGCAAACGAGGTTATGCTTTACGAGGAGGAGAAAAGCTCTCCCAAGATCAAAGCCGATTCAAGAGCACGAAGGGCCATCGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTCGGTTCCTGCATGACTATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAGCAGGAGTTCAGAGATCCTTGGCAGACATATTGAAAGACATATTTGACTCGTCTGAACATACTAAGGAGTCCGTGTCAAAGGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTTGCACCAATAATTGCTGCTTGGCTGCTGTTTGTTGCTGCGGTGGGAACGTATAACATTTTCCACTGGGATGTAAAAATCATCTATAAAATATCCCCATTCTACATATACAGATTCATCACAAAAATTGACATCCACAGATGGAGATTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTCATCTATCCGCTTCTTCTGTTATGCTATGCGGGTCAGGCTGCATATATTTCCAAAAATTTAACTTCTTCTGATTTTAATCATCTTAGCCAATCCATGCCAGGTCAGTGCAAACACTTGTACATAGTGTTATCCCTACTCTCTTCAGCCGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTCGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAAACCATAAACGGGCAGATTTACATCCCAGATGTCAACTGGCTATTGATGATTTTCAGCCTCACTGTAACTGTTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGCATTGGCTATTATAAGTGGAATGCTTGTGACGACGAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAAAAGGACATGATGGTGTCTGTGTACTTTCTTGTATGTTTTGGGTTCATAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTATTGGTAGTATCGATGACAGTGATGCTTTCATGGCATTATGGAAGTATGAAGAAGTACGAGTTTGATTTGCAAAACAAAGTATCAACAGAGTGGCTGATAGATATAAGTCCAGGCCTTGGGATTTCGAGGGTACCGGGAATTGGCTTCATTTACACGGAAATAGTGGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACAAATCTTCCTGCATTCCATCAAGTGCTGATCTTGGTATCATTCAAGTCCGTCCCTGTGCCTTACATAGGAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGGTGCATTGTGAGAAGTGGATACTGTGATCACATAAGGGACACTGGTGATTTTGAGGAGAAGATTATTCGTTCAATAGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCGAGGATGGGTTGCCCAGATGAAAGAATGATGTTTGTTGGAGATTCAAGGGATGATGGAAATGGTTTGGTCCCTCTGGAGGATTTAGAGTCATCATCATCATCATCATGCATGGTGCAAAGCCAGGTGAACAACGAATCTCAGATAAGCCCAGTGGCAGAAGAGGCGTTGGAGAGTAGCAGTGGTTGTAAGAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTTAGGAATGAGCTTTTGGAGCTGATCGATGCGAGGGAGAATGGAAGTGCATATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTGTATCGTTTCAGTGAAAAAAATTGTCGAGAACCTCCAGTGGCCCTTAAAATCCCTCATGCTGCTCTTGTGGAAGTTGGTGTTGTATGTACTATATAG	2391	0.4228	MDSHLFDQDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRTSDLAADQEVVYELFSFIFWTLTIISFLKYASIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDTSANEVMLYEEEKSSPKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASAGVQRSLADILKDIFDSSEHTKESVSKALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLLFVAAVGTYNIFHWDVKIIYKISPFYIYRFITKIDIHRWRLLGSVILCVAGSEAMFAGLGHFSKKSIKITFICFIYPLLLLCYAGQAAYISKNLTSSDFNHLSQSMPGQCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTVGFRDIVKIGNATALAIISGMLVTTSLMSLIIALYWEKDMMVSVYFLVCFGFIEAAYLSACLLQFHKGSWYLVVLLVVSMTVMLSWHYGSMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTEIVAGIPAFFSHFITNLPAFHQVLILVSFKSVPVPYIGESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESRMGCPDERMMFVGDSRDDGNGLVPLEDLESSSSSSCMVQSQVNNESQISPVAEEALESSSGCKKRKKVRFMLPHNSPKMQVSVRNELLELIDARENGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVVCTI*	797

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra1g0368	796	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	11	795	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vra1g0368	796	TIGRFAM	kup: potassium uptake protein	20	796	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vra1g0368	796	Pfam	K+ potassium transporter	22	612	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vra1g0368	796	PANTHER	POTASSIUM TRANSPORTER	11	795	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra1g0368	Vra-Chr1	4886569	4891061	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra1g0368	1	796	Inorganic Solute Cotransporters	AT1G70300	44.636	0.0	703

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra1g0368	K03549		K12236	gmx:100801073	1343.56

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