Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0368 ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCGTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACAGCACCTTTATATGTATTTGGGACAATGCGAACGAGCGATCTTGCAGCAGATCAGGAAGTTGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACCATAATTTCCTTCCTGAAGTATGCCTCCATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCACTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACACAAGTGCAAACGAGGTTATGCTTTACGAGGAGGAGAAAAGCTCTCCCAAGATCAAAGCCGATTCAAGAGCACGAAGGGCCATCGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTCGGTTCCTGCATGACTATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAGCAGGAGTTCAGAGATCCTTGGCAGACATATTGAAAGACATATTTGACTCGTCTGAACATACTAAGGAGTCCGTGTCAAAGGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTTGCACCAATAATTGCTGCTTGGCTGCTGTTTGTTGCTGCGGTGGGAACGTATAACATTTTCCACTGGGATGTAAAAATCATCTATAAAATATCCCCATTCTACATATACAGATTCATCACAAAAATTGACATCCACAGATGGAGATTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTCATCTATCCGCTTCTTCTGTTATGCTATGCGGGTCAGGCTGCATATATTTCCAAAAATTTAACTTCTTCTGATTTTAATCATCTTAGCCAATCCATGCCAGGTCAGTGCAAACACTTGTACATAGTGTTATCCCTACTCTCTTCAGCCGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTCGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAAACCATAAACGGGCAGATTTACATCCCAGATGTCAACTGGCTATTGATGATTTTCAGCCTCACTGTAACTGTTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGCATTGGCTATTATAAGTGGAATGCTTGTGACGACGAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAAAAGGACATGATGGTGTCTGTGTACTTTCTTGTATGTTTTGGGTTCATAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTATTGGTAGTATCGATGACAGTGATGCTTTCATGGCATTATGGAAGTATGAAGAAGTACGAGTTTGATTTGCAAAACAAAGTATCAACAGAGTGGCTGATAGATATAAGTCCAGGCCTTGGGATTTCGAGGGTACCGGGAATTGGCTTCATTTACACGGAAATAGTGGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACAAATCTTCCTGCATTCCATCAAGTGCTGATCTTGGTATCATTCAAGTCCGTCCCTGTGCCTTACATAGGAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGGTGCATTGTGAGAAGTGGATACTGTGATCACATAAGGGACACTGGTGATTTTGAGGAGAAGATTATTCGTTCAATAGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCGAGGATGGGTTGCCCAGATGAAAGAATGATGTTTGTTGGAGATTCAAGGGATGATGGAAATGGTTTGGTCCCTCTGGAGGATTTAGAGTCATCATCATCATCATCATGCATGGTGCAAAGCCAGGTGAACAACGAATCTCAGATAAGCCCAGTGGCAGAAGAGGCGTTGGAGAGTAGCAGTGGTTGTAAGAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTTAGGAATGAGCTTTTGGAGCTGATCGATGCGAGGGAGAATGGAAGTGCATATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTGTATCGTTTCAGTGAAAAAAATTGTCGAGAACCTCCAGTGGCCCTTAAAATCCCTCATGCTGCTCTTGTGGAAGTTGGTGTTGTATGTACTATATAG 2391 0.4228 MDSHLFDQDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRTSDLAADQEVVYELFSFIFWTLTIISFLKYASIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDTSANEVMLYEEEKSSPKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASAGVQRSLADILKDIFDSSEHTKESVSKALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLLFVAAVGTYNIFHWDVKIIYKISPFYIYRFITKIDIHRWRLLGSVILCVAGSEAMFAGLGHFSKKSIKITFICFIYPLLLLCYAGQAAYISKNLTSSDFNHLSQSMPGQCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTVGFRDIVKIGNATALAIISGMLVTTSLMSLIIALYWEKDMMVSVYFLVCFGFIEAAYLSACLLQFHKGSWYLVVLLVVSMTVMLSWHYGSMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTEIVAGIPAFFSHFITNLPAFHQVLILVSFKSVPVPYIGESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESRMGCPDERMMFVGDSRDDGNGLVPLEDLESSSSSSCMVQSQVNNESQISPVAEEALESSSGCKKRKKVRFMLPHNSPKMQVSVRNELLELIDARENGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVVCTI* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0368 796 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 795 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra1g0368 796 TIGRFAM kup: potassium uptake protein 20 796 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra1g0368 796 Pfam K+ potassium transporter 22 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra1g0368 796 PANTHER POTASSIUM TRANSPORTER 11 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0368 Vra-Chr1 4886569 4891061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0368 1 796 Inorganic Solute Cotransporters AT1G70300 44.636 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0368 K03549 K12236 gmx:100801073 1343.56