Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0268 ATGCTTCAGAACAACACACTCTCTCCCACTTCCTCTAATTTACCACACCACACTTCTCTTCTTCAGCACACTACCTTCAAGCTGGCGTTCCAAAACCAAGCCACCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGGTTCTGGAGGCCCTGATGACGAGGACAACCGGTGGCCGCCGTGGCTGAAGCCTCTACTCAAAGAGAGCTTCTTTGTTCAATGCAAGCTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTTACCACAAAGATCACCGCGCTATTCAGATAAGAAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGATTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGAAAGAACAACAGCAACAAGGTTCAGAGTTTCACACCGTCCACGCCACCACCGACTTCGGTTAATTATAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 789 0.4854 MLQNNTLSPTSSNLPHHTSLLQHTTFKLAFQNQATTVREIKPKNRRIMGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSATMASDSEDSYSSNSSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0268 262 MobiDBLite consensus disorder prediction 205 239 - -
Vra1g0268 262 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 35 258 - -
Vra1g0268 262 MobiDBLite consensus disorder prediction 196 262 - -
Vra1g0268 262 Pfam PLATZ transcription factor 116 187 IPR006734 -
Vra1g0268 262 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 35 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0268 Vra-Chr1 3710333 3712758 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra1g0268 PLATZ 8.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0268 - - vra:106774881 521.931