Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0176 ATGGATTTTCTTCTAAATTACCTGAATTCCACTACCGTTGGACTTCTGTCTCTAATCCTCTTCTGTTTATTTCTGTATAATCCCTTCAAATTTCGACAAGGTAAAGAGGCTCCCAGAGTTGCAGGAGCATGGCCAATACTTGGTCACCTTCCATTGTTGAGTCGTTCAAAGACACCCCATAGAACTTTGGCTGCTTTGGCTGAAAAATATGGACCCATCTTCACCATCCAACTTGGTTCAAAAAAGACTGTGGTAATCAACAACTGGGAAATAGCAAAGGAATGTTTCACCACAAACGACACGGCGGTTTCCTCTCGCCCCAAGCTTCTTGCCATGGAGCTCATAGGCTACAACAACGCCGTGTTTGGCTTTGCACCCTATGGTCCCTATTGGCGCGAGCTTCGAAAGATTACAACTTTAGAGATCCTTTCCTCTCGTCGAGTGCAACAACAGCAGCATGTTCGAGTCTCAGAACTTCAAAGCTCGATCAAAGAGTTGTATAACCTTTGGTGTAGCCAAAAGAATGAGTCTGGCTATGCCTTAATGGAGCTGAAGCAATGGTTTTCTCACCTGGCTTTCAACATGGTCCTTCGCATGGTGGTTGGGAAGCGATATTTTGGCAGTGAAAACTTGGACGATGAGAAGGCACAGCGATTTGTGAAAGCTGTGGAGGAATTCATGCGTCTGTTGGGTGTGTTCGCAGTGGGAGATACTATTCCTTGGTTGAGATGGCTTGATTTTGGAGGCCATGAGAAGGCAATGAAAGAAATTGCCAAAGAAATAGACAGTATTTTAGGTGAGGAGTTAGAGGAACATAGACAAAAGAAGGGTTTGGGTGAGAAGGTTGATGAAGTTCAAGATTTCATGGATGTCATGATTTCCTTGTTTGATGGAAAAACTATTGATGGGATTGATGCAGATACCTTGATCAAATCCACTGTGCTGACAGTGATTTTAGGAGGAACTGACACAACTAATATTGTTCTTACATGGGCAATATCTTTGATATTGAGAAATCCTTCTGTACTGGAAAAAGCTAAAACCGAACTAGACATTCAAATTGGGAAAGAAAATCTGGTGACTGAGTCGGATATAAGTAAGTTAACATATCTTCAAGCCATAGTCAAAGAAACTATGAGATTGTATCCTCCTGCTCCTCTTTCGGGACCTCGTGAATTCACAGAGAATTGTACTTTAAGTGGTTATAACATAGAAAAGGGAAGTCGTCTAATTACAAATCTTTGGAAGATTCAAACAGATAGCAATGTTTGGGAAGAGCCGTTGGAATTCAAACCAGAAAGGTTTCTAACAACTCACAAAGATGTTGATATCAAAGGTAAACATTTTGAGTTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCAGGAGTATCCTTTGGCCTTCAAATGGTGCATTTTATTCTTGCTACTTTTTTACATTCTTTTGAAATTCTAAGTGCATCACCTGATCCTATTGATATGAGTGAAACCTTTGGATTAGTCAACACCAAAACCACTCCACTTGAGATTCTTATTAAACCACATCTATCTTTTACTTGTTATCAAAACCTCTAA 1575 0.4044 MDFLLNYLNSTTVGLLSLILFCLFLYNPFKFRQGKEAPRVAGAWPILGHLPLLSRSKTPHRTLAALAEKYGPIFTIQLGSKKTVVINNWEIAKECFTTNDTAVSSRPKLLAMELIGYNNAVFGFAPYGPYWRELRKITTLEILSSRRVQQQQHVRVSELQSSIKELYNLWCSQKNESGYALMELKQWFSHLAFNMVLRMVVGKRYFGSENLDDEKAQRFVKAVEEFMRLLGVFAVGDTIPWLRWLDFGGHEKAMKEIAKEIDSILGEELEEHRQKKGLGEKVDEVQDFMDVMISLFDGKTIDGIDADTLIKSTVLTVILGGTDTTNIVLTWAISLILRNPSVLEKAKTELDIQIGKENLVTESDISKLTYLQAIVKETMRLYPPAPLSGPREFTENCTLSGYNIEKGSRLITNLWKIQTDSNVWEEPLEFKPERFLTTHKDVDIKGKHFELLPFGSGRRMCPGVSFGLQMVHFILATFLHSFEILSASPDPIDMSETFGLVNTKTTPLEILIKPHLSFTCYQNL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0176 524 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 Pfam Cytochrome P450 38 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vra1g0176 524 SUPERFAMILY Cytochrome P450 43 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PANTHER CYTOCHROME P450 82A2 1 522 - -
Vra1g0176 524 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0176 524 PANTHER CYTOCHROME P450 82C3-RELATED 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0176 Vra-Chr1 2064981 2067208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0176 37 521 Cytochrome P450 AT4G31970 49.187 1.83e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0176 - - gmx:100805047 813.913