Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0174 ATGGATTTTGTTCTAAATTACCTGAACACCACTACCATTGGACTTCTTTCTCTATTTCTCTTTTGTTTATTTTTGTACAATCCCTTCAAAAAATATAAAGGAAAAGAGGCTCCTAGGGTTGCAGGAGCATGGCCAATACTGGGTCATCTTCCACTGTTGAGTGGTCCAAACGCACCCCACAGAACTTTGGGTGCTTTGGCTGAAAAATATGGAGCCATCTTCACCATCCAACTTGGTTCCAAAAAGGCTTTGGTGATCAACAGCTGGGAAATAGCAAAGGAATGCTTCACCACAACAGACATGGTGGTTTCCTCTCGCCCCAAACTTGTCGCCATTGAACTCATGGGCTATAACCATGCCATGTTTGGCTTTGCACCCTATGGTCCCTATTGGCGCGAGCTACGAAAGATTACAACTTTAGAGATCCTTACCCCTCGTCGAGTGGAACAACTGCAGCATGTTCGTGTCTCCGAAGTTCAAAACTCGATCAGAGAGTTGTATACTCTTTGGTGTAGTCAAAAGGGTGAGTCTGGCTATGCCTCGGTTGAGCTGAAGCAATGGTTTTCTCACTTGACATTCAACATGGTTCTTAGAATGCTCGTCGGGAAGAGATATTTTGGTGGTGAGAACGTGGACGACGAGAAGGCACAGAGATGTGTGAGGGCTGTGGAGGAGTTCATGCGTCTGGTGGGTGTATTCGCAGTGGGAGATGCCATTCCTTGGTTGAGATGGCTTGATTTCGGAGGCCATGAGAAGGCAATGAAAGAAACTGCCAAAGATTTGGATAGTGTTTTAGGTGAGGAGTTAGAGGAACATAAACGAAAGAAGGGTTTCGGTAAAAAGGTTGATGAATTTCAAGATTTCATGGATGTCATGATTTCCATCCTTGATGGAAGGACTATTGATGGCGTTGATGCAGATACCGTTATCAAAGCCACCGTTCTGGGCATGATTGCAGGAGGAAATGACACAACTAATACTGTTATTACGTGGGTAATATATTCGATTTTGAGAAATCCTTTGGTATTGGAAAAAGTAAAAGCCGAACTAGACATTCATGTTGGAAAAGATAGATTGGTGAATGAGGATGATATAAGTAAGTTAAAATATCTTCAAGCCACAGTCAAAGAAACTTTAAGATTGTATCCTCCTGCTCCTCTCTTGCCACCTCGTGAATTTACAGATAATTGCACTTTAAACGGTTATAACGTAGAAAAAGGAACTCGTCTGTTTACAAATGTTTGGAAGATTCAGACAGATAGTAATGTTTGGGAAGATCCATTAGAGTTCAAACCAGAAAGATTTCTAACAACTCATAAAGACATTGACATTAGGGGTCATCATTCTGAATTATTACCATTTGGAAGTGGTAAAAGAATCTGTCCTGGAATATCCTTTGGTCTTCAAATGGTGCATTTTATTCTTGCTACTTTTTTTCATTCTTTCGAAATTTTAAATTCATTACCTTATCCTATTGATATGACTGAAACGTCTCAGTCAGCCAACACTAGAGCCATTCTCCTTGATATTCTTATCAAACCACGTCTATCTTTTACTTGTTATGAAAATAACTTGTCGCATTTTCATTAG 1590 0.4057 MDFVLNYLNTTTIGLLSLFLFCLFLYNPFKKYKGKEAPRVAGAWPILGHLPLLSGPNAPHRTLGALAEKYGAIFTIQLGSKKALVINSWEIAKECFTTTDMVVSSRPKLVAIELMGYNHAMFGFAPYGPYWRELRKITTLEILTPRRVEQLQHVRVSEVQNSIRELYTLWCSQKGESGYASVELKQWFSHLTFNMVLRMLVGKRYFGGENVDDEKAQRCVRAVEEFMRLVGVFAVGDAIPWLRWLDFGGHEKAMKETAKDLDSVLGEELEEHKRKKGFGKKVDEFQDFMDVMISILDGRTIDGVDADTVIKATVLGMIAGGNDTTNTVITWVIYSILRNPLVLEKVKAELDIHVGKDRLVNEDDISKLKYLQATVKETLRLYPPAPLLPPREFTDNCTLNGYNVEKGTRLFTNVWKIQTDSNVWEDPLEFKPERFLTTHKDIDIRGHHSELLPFGSGKRICPGISFGLQMVHFILATFFHSFEILNSLPYPIDMTETSQSANTRAILLDILIKPRLSFTCYENNLSHFH* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0174 529 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vra1g0174 529 PANTHER CYTOCHROME P450 82A2 1 522 - -
Vra1g0174 529 SUPERFAMILY Cytochrome P450 43 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PANTHER CYTOCHROME P450 82C3-RELATED 1 522 - -
Vra1g0174 529 Pfam Cytochrome P450 38 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0174 529 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0174 Vra-Chr1 2043029 2044874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0174 37 516 Cytochrome P450 AT4G31940 47.131 5.09e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0174 - - gmx:100805047 780.015