Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0173 ATGGATCTAAATGTCTCTGCAACTGTACTTGTTTCTCTGATCCTCTTCTATTTCTGTTTCTGTTTCTGTCGTCTCTTCAAATTTTCCAAAGGAAAAGAGGCTCCCAGAGTTGCAGGTGCATGGCCAATACTTGGTCATCTTCCATTGTTGAATGCTTCGAAGGCACCCCATAGAACTTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCCAACTTGGTTCAATAAACACTTTGGTAATCAACAACTGGGAAACGGCAAAGGAATGCTTCACCACAAACGACACGGTGGTTTCCTCTCGCCCCAAGCTTGCTGCCGCCGAACACATGACCTACAACAAAGCCATGTTCTCCGTAGCACCATGTGGTCCCTATTGGCGAACAACTAGAAAGATTGCTACTTCAGAGATTCTCTCCCCTCACCGAGTGAAGCAGCTACGTCATGTTTTTGAGTCCGAAGTTCAAGGTTCGATCAACGAGCTCTTTAACTTTTGGTGTAGCAACAAGAATGAGTGTGGCTATGCCTTGGTGGAGTTGAAGCAATGGTTTTCTCATTTGATATTCAACATTGTTCTTCAAATGGTTTTGGGAAAGCGATATTTTAGTTCAGGAACCGTGGATGATGAGAAGGCAGGGAGATGTGTGATGGCTGTGAAGGAGTTCATGCGTCTTTTCGGGGTGTTCACAGTGGGAGATGCTGTTCCTTGGTTGAGATGGTTTGATTTTGGAGGCCATGAGAAGGCCATGAAAGAAACTGCCAAGGAAATGGATAGTCTTGTAGGTGAGTGGTTAGAGGAGCATAGACAAAACAAGGCTTTGGGTGGAAAGGTTGATGGAGTTCAAGATTTCATGGATGTCATGATTTCAATGCTTGATGGACAAACGAATAATGGGGTTGATGCAGATACCATAATCAAATCCACTGTACTGACAATAATTGCAGGAGCAACTGACACAATAAGTGCTACTCTTACCTGGGCAATGTGTTTGATATTAAGAAATCCTAATGTATTAGAAAAAGTTAAAGAAGAGCTTCGCATAGTTTGTAAAGAGAAATGGCTTAGTGAGAATGACATTACTAAGTTAATATACCTTCAAGCTACAGTGAAAGAAACGTTAAGACTGTACCCTCCAGTTCCTCTCTCTGCACCTCATGAATTCACAGAAGATTGTACTATAAATGGCTACAATGTCACAAAGGGAACCCGTTTGATTACAAATCTTTGGAAAATCCACACAGATGAATATGTTTGGTCGGATCCATTAGAGTTTAAACCAGAAAGGTTTCTCACAACTTATAAAGATATTGACATGAGGGGTCATCATTTTGAACTGTTACCATTTGGAGGAGGTAGAAGGATTTGTCCTGGAATATCTTATGGCCTTCAAGTTGTTCATTTTGTTCTTGCTAGTTTTTTACAACATTTCGAAATCATAAACCCGTCAACTGAACCTCTTGATATGTCTGAATCCTTTGGATTAACCAACACCAAAACCACTCCACTTGATATTCTGGTTAAACCATGTCTGTCCTATAATTGTTATCAAAGAGATCTTTACACAAAACTATAA 1578 0.4081 MDLNVSATVLVSLILFYFCFCFCRLFKFSKGKEAPRVAGAWPILGHLPLLNASKAPHRTLGALADKYGPIFTIQLGSINTLVINNWETAKECFTTNDTVVSSRPKLAAAEHMTYNKAMFSVAPCGPYWRTTRKIATSEILSPHRVKQLRHVFESEVQGSINELFNFWCSNKNECGYALVELKQWFSHLIFNIVLQMVLGKRYFSSGTVDDEKAGRCVMAVKEFMRLFGVFTVGDAVPWLRWFDFGGHEKAMKETAKEMDSLVGEWLEEHRQNKALGGKVDGVQDFMDVMISMLDGQTNNGVDADTIIKSTVLTIIAGATDTISATLTWAMCLILRNPNVLEKVKEELRIVCKEKWLSENDITKLIYLQATVKETLRLYPPVPLSAPHEFTEDCTINGYNVTKGTRLITNLWKIHTDEYVWSDPLEFKPERFLTTYKDIDMRGHHFELLPFGGGRRICPGISYGLQVVHFVLASFLQHFEIINPSTEPLDMSESFGLTNTKTTPLDILVKPCLSYNCYQRDLYTKL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0173 525 Pfam Cytochrome P450 35 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 SUPERFAMILY Cytochrome P450 40 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PANTHER CYTOCHROME P450 82C3-RELATED 7 518 - -
Vra1g0173 525 Gene3D Cytochrome P450 27 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0173 525 PANTHER CYTOCHROME P450 82A2 7 518 - -
Vra1g0173 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0173 Vra-Chr1 2033147 2034961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0173 8 517 Cytochrome P450 AT4G31970 45.873 7.48e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0173 - - var:108319341 804.668