Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0148 ATGGATAGAAGATACTGTTACAAGGATTTGCTTCCTCTGATTGTTCTTGTTGCAAATGAATGCAATAACACAGCTTTGTTCACTCTCTTCAAAGCAGCCACTCTGCAAGGGATGAGTAGCTATGTCTTTGTCTCCTATGCCTATTCCTTGGCCTTTCTTGTTCTTCTTCCTATTACTTTTCTCTACAGAAGATCAAGAGTGGTTCCTCCTCTCAGCTTTTCAATCCTATCCAAAATTGCTCTTCTGGGACTCATAGGGTGTTCATCTCAGATTCTGGGGTATGTTGGGATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCCGCGTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGTCATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCGATATCTGGTGCATTTATTGTGACTTTCTGCAAAGGTCAATCGATCATCATTGCTGATAATTCCCCTTCAATTCAACTTTCACAATCAAATGGGATTCTTGCTTCAGTAGATACAAATTGGACCTTTGGTGGTCTTCTGCTGACAGCTTGCAATATACTGCTTACTATATGGTTTGTTTTACAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTATGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGGGGAGAAAAATTCAAGTGCGTGGAAAATAAGACCAGACATATCCCTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCTTGAGTAGTGCAATATATGCCTGGGGAATACACCTAAAGGGGCCTGTATATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATGTTGGAAGTTTGATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGAAGATGTTGGTAGCCAAGAATCACCAATCACTGAGAATGTTCCTCTCTTGCAAAGCTATGCAACTCTAAATTCTACAAAGAAAATAGATGCAAGAGTATAA 1110 0.4 MDRRYCYKDLLPLIVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPITFLYRRSRVVPPLSFSILSKIALLGLIGCSSQILGYVGISYSSPTLSSAISNLTPAFTFILAVICRMEKIVIRSRTTQAKIWGSIISISGAFIVTFCKGQSIIIADNSPSIQLSQSNGILASVDTNWTFGGLLLTACNILLTIWFVLQVEILKEFPDELTMVFFYNLYAAIVASIVGLIGEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYVGSLIGGTVISIGFYTVMWGKATEQKEEEEDVGSQESPITENVPLLQSYATLNSTKKIDARV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0148 369 PANTHER WAT1-RELATED PROTEIN 8 356 - -
Vra1g0148 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 154 - -
Vra1g0148 369 PANTHER WAT1-RELATED PROTEIN 8 356 IPR030184 GO:0016021|GO:0022857
Vra1g0148 369 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020|GO:0016021
Vra1g0148 369 Pfam EamA-like transporter family 26 153 IPR000620 GO:0016020|GO:0016021
Vra1g0148 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0148 Vra-Chr1 1709331 1713178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0148 1 356 Nodulin-like Gene Family AT3G28050 50.136 6.54e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0148 - - gmx:100791805 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0148 1 1709331 1713178 Vra1g0148 1 1709331 1713178 ECH