Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0147 ATGGCAAGAGAACGATCCTTTTACAGAGATTTTCTGCCAGTTTTGGTCCTTCTTGGCAATGAATTCAATGACATGAGTTTACTCACACTCTTCAAAGTAGCCTCACTGCAAGGATTGAACAGCTATGTCTTTGTGGCCTATGCTTATGCTGTTGCAACCACTGTGCTTCTTCCTGTCACTTTGTTCCACAGAAGATCAAGAGTGGTTCCTCCACTGAGTTTCTCCACAGTATCCAAAATAGTTCTTCTTGGAGTGATAGGAAGTTCATCTCAGATACTGGCTTATGCAGGAATCAGCTATAGTTCTCCAGCTCTTGCTTCATCAATTGGCAATCTGGTGCCTGCTTTCACCTTCATCCTTGCCGTAATCTGCAGGATGGAAAAGTTAGCTGCTAAAAGTAGGAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATATCAGGTGCATTTGTTCTGACTTTCTACAAAGGACCACCGATCGTCAATGCTCACAAACATCTTTCCTTGTCACTTCAAGATCAAATTAACTTTCTTAAATCAGAGGATGCTAGTTGGGCCACTGGTGGCATTCTGCTGATGGCTGACTATATTCTGACTTCAGTATGGTACATTTTAGAGGAGGATATCTTGAGAGTGTTCCCGGATGAACTTACTCTAGTCTTGTTGTACAATGTCACTGCCACAATATTCACTGCAACTGTAGGTGTATTTGCTGCGCCAAGTGCTAGTGCTTGGAAAATAGGTCTAAATGTTTCACTGATCTCCATTGTTAGCTCAGGACTATTTGGAAAGTTAATGAGCAATGTAATTTATGCCTGGACATTGAATTTAAAGGGGGCTGTCTTTGTAACATCCTTCAGGCCATTTCAAATTGTGATTGCAGTTGCAATGGGGGTTTTGTTCCTTGATGATACTCTGTACATTGGAAGCGTAGTTGGAGCCATAATAGTATCGATTGGCCTTTATATTGTGTTGTGGGGCAAGGCAACAGAAGAGATAGAGGAAGTTGTTGGTGGCTTGGAATCACTAACTGCTGAGAATGTTCCTCTCTTGCAAAACCACAGAACTGAAACATCAGAAAAGAATGTTTAA 1095 0.4146 MARERSFYRDFLPVLVLLGNEFNDMSLLTLFKVASLQGLNSYVFVAYAYAVATTVLLPVTLFHRRSRVVPPLSFSTVSKIVLLGVIGSSSQILAYAGISYSSPALASSIGNLVPAFTFILAVICRMEKLAAKSRSSQAKVMGSIISISGAFVLTFYKGPPIVNAHKHLSLSLQDQINFLKSEDASWATGGILLMADYILTSVWYILEEDILRVFPDELTLVLLYNVTATIFTATVGVFAAPSASAWKIGLNVSLISIVSSGLFGKLMSNVIYAWTLNLKGAVFVTSFRPFQIVIAVAMGVLFLDDTLYIGSVVGAIIVSIGLYIVLWGKATEEIEEVVGGLESLTAENVPLLQNHRTETSEKNV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0147 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
Vra1g0147 364 PANTHER WAT1-RELATED PROTEIN 6 353 - -
Vra1g0147 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 329 - -
Vra1g0147 364 PANTHER WAT1-RELATED PROTEIN 6 353 IPR030184 GO:0016021|GO:0022857
Vra1g0147 364 Pfam EamA-like transporter family 31 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0147 Vra-Chr1 1699729 1702786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0147 1 358 Nodulin-like Gene Family AT3G28050 44.205 1.44e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0147 - - gmx:100790743 544.273