Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0061 ATGAATACAACGCCGTTTATGGACAAGCAGATTATGGATCTCACTCATGGATCTTCCACTGCGCAGCAACACAGCAAGGACTTCATCGACCTCATGAAACACGAACCACCGCAGCAACAAAATCATCATCGTGAAGAAGATGATGATGAAGAGGAAGAAGAAAATGCGCGTGGTAATGGGATCAACAAGGACGACATCATTCCCAGTTACGATTTCCAGCCGATTCGCCCTCTCGCCTCTTCCAGTTACGATTCTGCCCCCAATTTCGGTGCTGCATTCTCACGCCCTTGGAACTCCGATTCCAACTCCAAAAATTACAGTTCTCTGGATTCATTGGAACCTGCAAAGGTGATTGTAGAAAAGGACAGAAGTGCTTCTGATGCTTCAATGTTGTCTGACATTGATCGCACCATGAAGAAGCATATGGACAATATGCTTAATGTACTGGAAGGTGTCAGTGCACGGTTAACACAATTAGAAACTAGAACCCACCATCTTGAAAATTCTGTGGATGATTTGAAGGTATCTGTCGGGAATAATCATGGTAGCACTGATGGAAAATTGAGGCAACTGGAGAATATTCTTCGAGAGGTGCAATCTGGGGTGTTAACTATCAAGGACAAGCAAGATATAATGCAAGCTCAGCTGCAATTGGCAAAGCTACAAGTGTCCAATACGAATCAGAAATCAGAAGCTCAATCTAACACAACCACCGATCCTGTGCAGCAAGCTGTTCCTGCTCCTGTGCAATCTCAACCACAGCTTCCTACCCCTGCTAATCTTCCTCAGTCCATTCCTGTTATTCCTCCCCCTAATGCTCCTCCTCAACCTCCTCCACAACAGAGTTTGCCACCACCCCCTCAAGTTCAACTTCCAAGCCAATTCCCTCCAAACCAAATCCAAGCTGCTCCTCCGAGAGATCCATATTTCCCAGCACCTGTTCAGTCTCAGGAAACTCCTAATCAGCAATACCAACTTCCTTTATCGCAACATACTCACCCCGCTGCAGCCCCGACCCCACATCAGCAATATCAACAGACCCCACATCCCCAATACCCTCAGCCGCCACCTCATGTTCCTCAACAGCAGCCACCACCTCATGTTCCTCAACAACAGCCACCATCACATCCATCCATGAATCCATCTCAACTTCAACCTCCTCTGGGGCACCATGTTGAGGAACAACCACCTTATCCTCCTCAGAATTATCCTCCCAATGTCCGCCAGCCACCATCTCAGTCCCCCACCGGTCCTCCTCCTCCTCAACAGTTCTATGGGGCACCATCCCACTCCTATGAACCGCCATCTAGCAGACCCAGTTCAGGCTATTCTTCTGGATATGGTTCCCTATCTGGCTCTGGCCCTGCTGAGCAGTATCGTTATGGCGGGCCACCTCAGTATGGTGGCAATCCTGCACTGAAACCACCACAACTGCCAACTGCTTCAGTGTCTCCTAGTGGTGGAAGCGGTTACCCTCAGCTCCCAACTGCCAGGATACTCCCACAAGCACTCCCTACTGCATCTGCAGTGAGTGGTAGCTCAGGTTCTGCTGGAACTGGAGGAAGGGTTTCCGTTGATGATGTGGTTGATAAAGTTGCTAATATGGGATTCCCCAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACTGAGAATGGTCAATCAGTGGACCTAAATGCAGTGCTGGATAAGCTCATGAATGATGGTGAAGTCCAACCCCCACGAAGTTGGTTTGGTCGGTAG 1743 0.49 MNTTPFMDKQIMDLTHGSSTAQQHSKDFIDLMKHEPPQQQNHHREEDDDEEEEENARGNGINKDDIIPSYDFQPIRPLASSSYDSAPNFGAAFSRPWNSDSNSKNYSSLDSLEPAKVIVEKDRSASDASMLSDIDRTMKKHMDNMLNVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILREVQSGVLTIKDKQDIMQAQLQLAKLQVSNTNQKSEAQSNTTTDPVQQAVPAPVQSQPQLPTPANLPQSIPVIPPPNAPPQPPPQQSLPPPPQVQLPSQFPPNQIQAAPPRDPYFPAPVQSQETPNQQYQLPLSQHTHPAAAPTPHQQYQQTPHPQYPQPPPHVPQQQPPPHVPQQQPPSHPSMNPSQLQPPLGHHVEEQPPYPPQNYPPNVRQPPSQSPTGPPPPQQFYGAPSHSYEPPSSRPSSGYSSGYGSLSGSGPAEQYRYGGPPQYGGNPALKPPQLPTASVSPSGGSGYPQLPTARILPQALPTASAVSGSSGSAGTGGRVSVDDVVDKVANMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGEVQPPRSWFGR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0061 580 MobiDBLite consensus disorder prediction 27 45 - -
Vra1g0061 580 Pfam UBA-like domain (DUF1421) 525 569 IPR010820 -
Vra1g0061 580 MobiDBLite consensus disorder prediction 429 452 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 314 348 - -
Vra1g0061 580 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 580 - -
Vra1g0061 580 Coils Coil 142 162 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 1 69 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 506 520 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 227 524 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 477 491 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 251 311 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 349 381 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 1 26 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 392 425 - -
Vra1g0061 580 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 580 - -
Vra1g0061 580 MobiDBLite consensus disorder prediction 227 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0061 1 310 Trihelix Transcription Factor Family AT5G14540 43.072 6.09e-65 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0061 - - gmx:100777464 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0061 1 738164 741921 Vra1g0061 1 738164 741921 ECH