Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0041 ATGCTTTGCTATGAAACAGCAGCAACAGTTGCAGCATTCTTCTGCATCATCTATTTCTTCCATCGGAGATTCCCTCTCCTCACTGACTACCCCATCATCGGAAGGCTACCGGAGGTACTCTGCAATCTGTGGCGCATCCATGATTTTACAGTTCAGGTGCTCAAATCACGTGGGGCCACTACTCAGCTCACTGCACCTTGGTTTACCAATATCAACTATTTGGTCACTACCGACCCTCTCAACGTGCATCATGTCTTGACCAAGAATTTCAACAACTATGTCAAAGGACCAGAATGTCGTGAGATTTTAGAGGCTTTCGGACATGGGATATTTGCTGCTGATGAAGAAGCATGGAAATACAACAGGGATCTCTTCCATTCCCTCTTTAAACACAGAAGCTTCGAGGAGTTTCTGGAGAAAACCATTCGGAAGAAGGTGCAGAATAGTCTACTTGTCGTGTTGGATCATGTGCAACAACAAGGGAGCGTGGTGGATCTTCAAGATGTCTTCAGTCGCTTCACTTTCGATAACATATGTTCTATAGTTCTTGGATACGACCCTAATTGCCTTTCCCTTGATTTTCCACAAGTTGCAATCGAGAAGGCTTTTCATGAAATAGAGGAGTCCGTTTTCTACAGAAATATATTGCCAAAGAGTCTTTGGAAGCTGCAGAAATGGCTTCAGATTGGTAAAGAGAAGAAGATGACAGAAGCATGCATAACAATTGATGAGTTCATATATTCATGCATAGCGTCTAAGAAAGAAGATCTAAGCAGGTACGAGGAAAACGAAACGGGAGAAACTTTTCATGTTGATTTGTTAACAACTTTGATGAGAGAAGGAAAGGGAAAAGGAGAAGCACATGAAGATATATTTCTAAGGGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGAGATACCTTAACTTCAGCTCTCACATGGTTCTTTTGGCTTGTTGCTACAAACCCTTTAGTGGAAGACAAGATTGTTGAAGAGATGAATGAAAAGCTTGGAAGCAATGAGAAGACAGTTTTAAGTGCAGAGGAGGTGAAAAAGCTGGTTTATCTACACGGTGCTATATGTGAATCATTGAGGCTGTTTCCTCCCATACCCTTCCAACGCAAGGAAGCACTTAAAGCTGACGTGCTTCCTAGTGGTCATGGTGTTAATCCCAACACAGTTATACTTTTTTGTTTGTATTCAATGGGGAGATATGAGGAAATATGGGGAAAAGATTGCATGGAGTTCAAGCCAGAAAGATGGATATCAGAAAAAGGAGGTAATGTTTATGTACCATCTTACAAATTCATTGCTTTCAATGCAGGACCAAGAACTTGCTTGGGGAAAAACTCGTCCTTTGTTCAAATGAAGATGGTGGCAACTGCAATTTTGCACAAGTATCATGTCGAAGTGGTGGAAGGTTGTATTGTTAAGCCAAACCTTTCAATCGTTCTTCTGATGAAGGATGGTTTAAAGGTTAAGATAAGAAAAAGAGAAACTTAA 1503 0.4118 MLCYETAATVAAFFCIIYFFHRRFPLLTDYPIIGRLPEVLCNLWRIHDFTVQVLKSRGATTQLTAPWFTNINYLVTTDPLNVHHVLTKNFNNYVKGPECREILEAFGHGIFAADEEAWKYNRDLFHSLFKHRSFEEFLEKTIRKKVQNSLLVVLDHVQQQGSVVDLQDVFSRFTFDNICSIVLGYDPNCLSLDFPQVAIEKAFHEIEESVFYRNILPKSLWKLQKWLQIGKEKKMTEACITIDEFIYSCIASKKEDLSRYEENETGETFHVDLLTTLMREGKGKGEAHEDIFLRDAVFNLFVAGRDTLTSALTWFFWLVATNPLVEDKIVEEMNEKLGSNEKTVLSAEEVKKLVYLHGAICESLRLFPPIPFQRKEALKADVLPSGHGVNPNTVILFCLYSMGRYEEIWGKDCMEFKPERWISEKGGNVYVPSYKFIAFNAGPRTCLGKNSSFVQMKMVATAILHKYHVEVVEGCIVKPNLSIVLLMKDGLKVKIRKRET* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0041 500 Gene3D Cytochrome P450 16 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 SUPERFAMILY Cytochrome P450 17 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 Pfam Cytochrome P450 62 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 498 - -
Vra1g0041 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0041 500 PANTHER CYTOCHROME P450 4 498 - -
Vra1g0041 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0041 Vra-Chr1 520534 522036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0041 12 498 Cytochrome P450 AT4G39490 45.383 4.12e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0041 - - gmx:100792360 770