Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0029 ATGTCGAAAATTACAGCAGTAGGTTGTTTGTTTCTAGCAATATTTGTTGGAGTGCAATTGAAGTGTCTTGAGAGTGGTATTGCTCTTCGTATGGACGCAGTAACAGTGCAAATAACGAATCGCTTAAGCGAGAGATATTTGGCTGTTCATTGCAAAGACAAGCACAATGATCTTGGGCTGCATCAACTGAATGTTGGTGAAACATATGGTTTTAAGTTCTATCCTGAGCTTATTTTTCCTACGACATTGTACTTTTGTCATTTTACTTGGTTGGAAGAAGATCATTATTTTGACATATATGTCCAAAAACGAGATGGTTACTGCAATAGTGATATTTGTGCTTGGGACATACTTCCCACTGGACCATGTCGGACAAATAAAGATCCTCGACAGTGCTATGGATGGAATCCACCATCTGCAGTGCAACAAAGTAACAACACTTTACTTCTATGA 453 0.3863 MSKITAVGCLFLAIFVGVQLKCLESGIALRMDAVTVQITNRLSERYLAVHCKDKHNDLGLHQLNVGETYGFKFYPELIFPTTLYFCHFTWLEEDHYFDIYVQKRDGYCNSDICAWDILPTGPCRTNKDPRQCYGWNPPSAVQQSNNTLLL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0029 150 PANTHER S-PROTEIN HOMOLOG 18-RELATED 28 135 - -
Vra1g0029 150 PANTHER - 28 135 IPR010264 -
Vra1g0029 150 Pfam Plant self-incompatibility protein S1 35 135 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0029 34 139 Carbohydrate Esterase AT3G16970 40.708 2.24e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0029 - - pvu:PHAVU_004G003100g 194.126