Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1551 ATGACACGTCATTTCCTCCTCCTTTCTCTGTTATTCTTTGCGTCCACACTCTCTCGTCTCGTCCTAACTGTCACCGCCGGTCACGCTTCCGCTTTCACTTCCAGTCACGCTTCTGGTGACACCGACTTCATTCGCCAAAGCTGCAACGCAACGTTGTACCCTGACCTATGCTTCTCCTCGCTCTCTCGCTACGCCGCCGCGGTGCAACGTAGCCCCGGCGGCCTCGCGCGCGTGGCCGTTGCCGTGGCGCTTGCTAAGGCGCACGGCGTAGCGGCCTATCTCTCGCACCAGACCGCTGCGGTGATCGACGAGGATTCCGGCGCAGGTGCCAGCGCCGCCGTGAACGACTGCTTCGCGAACCTGGAGGACGCTGTGGACGAGATCCGCGGCTCGTTGAAGCAGATGCGGCGACTGAGACCGAACGAGGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGAAGAAGGTCCCGTGAAGACGAGCGTATGCGATCGCGTAACCAGAGTGAAGAAGTTCACAAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGTTATAA 630 0.6048 MTRHFLLLSLLFFASTLSRLVLTVTAGHASAFTSSHASGDTDFIRQSCNATLYPDLCFSSLSRYAAAVQRSPGGLARVAVAVALAKAHGVAAYLSHQTAAVIDEDSGAGASAAVNDCFANLEDAVDEIRGSLKQMRRLRPNEDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCDRVTRVKKFTSNALALVNGFANKL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1551 209 CDD PMEI-like_3 47 207 - -
Vra11g1551 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 205 IPR035513 -
Vra11g1551 209 Coils Coil 118 138 - -
Vra11g1551 209 Pfam Plant invertase/pectin methylesterase inhibitor 42 201 IPR006501 GO:0004857
Vra11g1551 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 20 203 IPR006501 GO:0004857
Vra11g1551 209 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 17 208 - -
Vra11g1551 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 208 - -
Vra11g1551 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 205 IPR035513 -
Vra11g1551 209 SMART PMEI_2 39 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1551 Vra-Chr11 19319052 19319929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1551 6 201 Carbohydrate Esterase AT3G49220 28.431 7.56e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1551 - - gmx:100797734 296.204