Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1466 ATGTTGGTGAAATACTTGGCTCAATTCTACTCTCATATCAAATGGGTGTTTGATTTCCTTCTCTTTTACCCATTCTATAAGCTCCATGATTCTCAAATGCCAATGATTGGAGAAGAGCAGAGCATATGCCACTATGCACACAACCCTGGCACAGAGGAAGATGCTGATTGTGCTGTTTGTCTGTGCAAAATTGGAGATGGTGAAGAGATTAGAGTTCTTAGGTGTGAACATTTCTTTCACAGAAATTGCTTGGATGCATGGGCTGCTCTCAAAAACGCATCTTGCCCTCTTTGCAGAGAATCGATTAGGCCACGAAGAACCCTCAATGAGGTTGGAGCTGAAGTTCTGTGGTTTGAATTTTGCTCTGTAAACACTAATGAGGGCGACAGATGGTGGCTTCGTTGA 405 0.4296 MLVKYLAQFYSHIKWVFDFLLFYPFYKLHDSQMPMIGEEQSICHYAHNPGTEEDADCAVCLCKIGDGEEIRVLRCEHFFHRNCLDAWAALKNASCPLCRESIRPRRTLNEVGAEVLWFEFCSVNTNEGDRWWLR* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1466 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 106 IPR013083 -
Vra11g1466 134 ProSiteProfiles Zinc finger RING-type profile. 57 99 IPR001841 -
Vra11g1466 134 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 127 - -
Vra11g1466 134 Pfam Ring finger domain 56 99 IPR001841 -
Vra11g1466 134 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 3 127 - -
Vra11g1466 134 SUPERFAMILY RING/U-box 49 108 - -
Vra11g1466 134 SMART ring_2 57 98 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1466 53 102 C3H Transcription Factor Family AT1G80400 48.000 1.43e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1466 K16282 - vvi:104878969 132.109