Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1455 ATGAGCATTAAGAACTCTCTCATGGATCCTCATTCTGTCTTGAGTAACTGGGATGAAGATGCTGTAGATCCTTGCAACTGGGCTATGGTCACATGTTCCTCTGATCATTTTGTCACTGCCCTTGGGATTCCAAGCCAAAACTTATCTGGCCGCCTCTCACCAAGCATAGGCAGTTTAACAAACCTCATCACTGTGCTTCTGCAGGATAACAATATTACAGGACCAATCCCCTCTGAGATTAGTAGGCTCCAAAAGCTTCAAACTCTTGATCTTTCGGACAATTTCTTCACCGGTCAACTTCCAGATTCCCTTTCCCAAATGAAGGGTCTCCATTACTTGCGGCTAAATAATAACAGTTTGACTGGACCAATTCCTTCCTCTTTGGCTAACATGACTCAGCTTGCCTTTCTGGATATCTCTTATAATAACTTGAGTGGACCTGTGCCAAGAATAAATGCAAAAACATTCAACATCGTAGGCAATCCTCAGATATGTGCCGCTGGAGTCGAGCAGAACTGCTTCAGGACAACGTCAATTCCTTTGGCTCCGAATAATTCTCAAGATTCCCAATCCACCAAAAAACCAAAGAGTCACAAAGTAGCCTTGGCGTTTGCCTCAAGCTTAAGCTGTATATGCTTACTAATTCTGGGACTTGGCTTCCTCATATGGTGGAGACAAAGACATAACAAGCAAATATTCTTTGATGTTAATGAACAACACCGTGAAGAGGTTTTCCTTGGAAACCTCAAGAAGTTCCACTTCAGAGAACTTCAGCTTGCTACAAACAACTTCAGCAGCAAGAACATGATTGGCAAAGGTGGTTTTGGACATGTCTACAAAGGGTATCTTCAGGATGGTACGGTTATAGCAGTAAAAAGGCTCAAAGATGGTAACGCTATTGGAGGTGAGATCCAATTCCAGACTGAAGTTGAGATGATCAGCTTAGCCGTCCATCGGAATCTTCTTCGGCTATATGGATTCTGCATGACAACTACAGAGAGGCTCTTGGTTTATCCGTACATGTCAAATGGAAGTGTCGCTTCTCGTCTGAAAGCCAAGCCAGCATTGGACTGGCCTACCAGGAAGAGAATAGCTTTAGGAGCTGGAAGAGGCTTGCTATATTTACATGAACAGTGTGATCCAAAGATTATTCACAGGGATGTAAAGGCAGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTAGTTGGAGATTTTGGGCTGGCAAAGCTTTTAGATCACAGGGATTCACATGTGACAACAGCAGTGAGAGGCACTGTTGGACACATAGCTCCTGAGTATCTCTCAACAGGTCAATCTTCTGAGAAGACAGATGTGTTTGGATTTGGAATTCTTCTTCTTGAACTAATATCTGGCCAAAGAGCGCTTGAGTTTGGAAAAGCAGCAAACCAGAAAGGAGCCATGCTAGACTGGGTGAAGAAAATCCATCAAGAGAAGAAAATTGACTTGTTGGTTGACAAGGACCTGAAAAACAACTATGATAGGATTGAGCTTGATGAAATTGTGCAAGTGGCTCTTTTATGTACTCAGTACCTTCCAAGTCACAGACCCAAGATGTCTGAGGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCCTCGCAGAGAGCAGAATCCACAAGAAGCAGAGGAAATGAACTCTCTTCTTCAGAGCGTTACTCTGATCTCACTGATGATTCCTCACTACTTGCACAAGCAATGGAACTTTCTGGGCCAAGATGA 1755 0.4336 MSIKNSLMDPHSVLSNWDEDAVDPCNWAMVTCSSDHFVTALGIPSQNLSGRLSPSIGSLTNLITVLLQDNNITGPIPSEISRLQKLQTLDLSDNFFTGQLPDSLSQMKGLHYLRLNNNSLTGPIPSSLANMTQLAFLDISYNNLSGPVPRINAKTFNIVGNPQICAAGVEQNCFRTTSIPLAPNNSQDSQSTKKPKSHKVALAFASSLSCICLLILGLGFLIWWRQRHNKQIFFDVNEQHREEVFLGNLKKFHFRELQLATNNFSSKNMIGKGGFGHVYKGYLQDGTVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKAKPALDWPTRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDLLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1455 584 Pfam Leucine rich repeat 85 144 IPR001611 GO:0005515
Vra11g1455 584 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 584 - -
Vra11g1455 584 ProSiteProfiles Protein kinase domain profile. 264 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1455 584 SMART serkin_6 264 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1455 584 Gene3D Phosphorylase Kinase; domain 1 233 340 - -
Vra11g1455 584 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Vra11g1455 584 MobiDBLite consensus disorder prediction 551 575 - -
Vra11g1455 584 Gene3D Transferase(Phosphotransferase) domain 1 341 553 - -
Vra11g1455 584 Pfam Leucine rich repeat N-terminal domain 2 33 IPR013210 -
Vra11g1455 584 SUPERFAMILY Protein kinase-like (PK-like) 242 534 IPR011009 -
Vra11g1455 584 SUPERFAMILY L domain-like 2 267 - -
Vra11g1455 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Vra11g1455 584 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Vra11g1455 584 MobiDBLite consensus disorder prediction 541 584 - -
Vra11g1455 584 Pfam Protein kinase domain 265 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1455 584 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1455 Vra-Chr11 17752574 17756146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1455 1 584 Receptor kinase-like Gene Family AT5G16000 74.705 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Vra11g1455 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1455 - - gmx:100804283 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1455 11 17752574 17756146 Vra11g1455 11 17752574 17756146 ECH