Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1449 ATGGTTCCTAGTGAGATAAGAGGAGTCCAATATCTAGCACCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTGTGCAAACTGACATTAATCCAAACCTCCATCTCAACACCCTCTTAAGCAACTTTCCAAACTGCCACTTCCCTCATTCAGGCCTTGAATTTCTTGCTCCTCCCTCCTCATACCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAAATCCACTTTAACATCATCGACGAAAGGAAACACAGGAGAATGATATCCAACCGAGAATCCGCCCGCAGATCAAGGATGAGGAAGCAAAAGCACTTGGATGAACTCTGGTCACAGGTTGTTAGGCTCAGAACTGAGAACCACAACTTGATTGACAAACTCAACCATATGTCCGAGTCCCATGACAGAGTCTTGCAAGAGAACACACGCCTCAAACAAGAAGCTTCTGATCTCCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCCTTTGCTTGCGCCATGGAAGAATTGGAGGACCTTCCATGCAACAAACCTGATCCCTCAAACCAATCAATCACTCCTGCTGATATGATTCATCATGAATGA 591 0.4535 MVPSEIRGVQYLAPENPFLVPPNFGLVQTDINPNLHLNTLLSNFPNCHFPHSGLEFLAPPSSYLSSNSTSDEADEIHFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSESHDRVLQENTRLKQEASDLRQMLADMQIGTSFACAMEELEDLPCNKPDPSNQSITPADMIHHE* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1449 196 Gene3D - 82 137 - -
Vra11g1449 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vra11g1449 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Vra11g1449 196 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Vra11g1449 196 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Vra11g1449 196 MobiDBLite consensus disorder prediction 176 196 - -
Vra11g1449 196 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Vra11g1449 196 Coils Coil 128 155 - -
Vra11g1449 196 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Vra11g1449 196 PANTHER BZIP PROTEIN (ATBZIP48) 1 184 - -
Vra11g1449 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 184 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1449 Vra-Chr11 17665574 17666561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1449 42 172 bZIP Transcription Factor Family AT3G30530 57.241 2.73e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra11g1449 bZIP_1 6.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1449 - - gmx:778126 342.428