Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1447 ATGTTATCATTTCTTCTAGTCCGTTTAGTTCCTTTAATACTTTTAGCGATATTTCGAATCCTTTCAAACCATAAACCGGTGATAGTTACTGAAGAACAGGCTGCTGAAGAACCGGCTGGTGGAGACGAAGAATCGTCGGTCGGTGGAGCAGACGCTGGAGCAGACAATGTCGTGATCTTGCCGGAGCTCAATGAAGAACCAACTGGTGGAGCGGTTGATGGAGCAGACCATGGCGTGGTAGTTATCACGCCGGAGCTGAGTACAACTGATGGAGTCCTTGAAGAAGCTGCTGGTGGAGCAGTCACTGAAGCTAGTGGAACTGAAGCCAGTGGAACAACCGATGGAGCCGGTAGAGAAGACGAATACACAGAACACAGGCAAGAATTTTTTCGAAATTTAATTAATGGGTACTGTTTGATCATTTTTGGATTTATATCCAAAAAGCCAATTAAGACCCTCATACGAGAGGGATCTGAGAGGTATCACGATTCCCAATCGGCGTCTCGCGAAATCGAAGCGCTGCGGATCCTGAGAGGGTCCCAAAACGTGGTCGTTCTGCACGAGTTCTTCTGGCGCGAGGACGAGGACGCGGTTCTCGTGCTCGAGTTTCTCGGAACCGAACTCGCCGCCGTGATCGAAAAAGGTGGTGTCGGAGTCGGTGAGGTTAAGAGGTGGATGGTGCAGGCTCTGACTGCTGTGGATGAGTGCCACCGGAATATGATCGTTCATAGAGACTTAAAACCCGCGAATTTTTTAGTTTCCGATGACGGGGTGCTCAAGTTAGCAGATTTTGGACAGGTTTAA 804 0.4888 MLSFLLVRLVPLILLAIFRILSNHKPVIVTEEQAAEEPAGGDEESSVGGADAGADNVVILPELNEEPTGGAVDGADHGVVVITPELSTTDGVLEEAAGGAVTEASGTEASGTTDGAGREDEYTEHRQEFFRNLINGYCLIIFGFISKKPIKTLIREGSERYHDSQSASREIEALRILRGSQNVVVLHEFFWREDEDAVLVLEFLGTELAAVIEKGGVGVGEVKRWMVQALTAVDECHRNMIVHRDLKPANFLVSDDGVLKLADFGQV* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1447 267 ProSiteProfiles Protein kinase domain profile. 87 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1447 267 SUPERFAMILY Protein kinase-like (PK-like) 153 265 IPR011009 -
Vra11g1447 267 SMART serkin_6 139 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1447 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Vra11g1447 267 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 165 266 - -
Vra11g1447 267 Gene3D Phosphorylase Kinase; domain 1 147 213 - -
Vra11g1447 267 Pfam Protein kinase domain 151 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1447 267 PANTHER MAPK/MAK/MRK OVERLAPPING KINASE 165 266 - -
Vra11g1447 267 Gene3D Transferase(Phosphotransferase) domain 1 214 267 - -
Vra11g1447 267 MobiDBLite consensus disorder prediction 98 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1447 Vra-Chr11 17646610 17651956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1447 163 266 Core Cell Cycle Gene Families AT4G28980 68.421 1.10e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Vra11g1447 Pkinase 1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1447 - - vra:106776849 498.049