Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1385 ATGTTTCTTGCACTCTCTTCTATTGTAACTCTCTTTCTTTTGGCTTCTAATGAAGCAGTGCTAGCACATACTCACTACTCTCATACTCATCATTATCATCGTCATTATCATCATCATCATCGTCGTAACCATCATGCTCATGATCATGATCATGATCATTCTCATCACAGTCAAAAACAATTCCATGATAAGGCAGCTCCTTCTCAGAGGATAATCACTGTTGATCAATCTGGTAATGCAGACTTCTCCAAGATACAATCTGCCATTGATTCAGTCCCTTCCAACAACAAGCAGTGGATTTACATCAACGTGAATGCAGGCACATACAGGGAGAAGTTGAAGATCCCAGAAGACAAGCCTTATATAGTGCTGAAAGGAATGGGAAAAGATAAGACTTTTGTTGAGTGGGATGACCATGATTCAAGTGCACAGAGTCCGACATTCTTAACCATGGCTAACGACATTGTGGTTAAGACCATTAGCTTCAGGAATTCTTTCAATGATCCAAAAAAGGGGAATCCGATGACACCTGCAGTGGCTGCAATGATAAGTGGAGACAGGTCATCTTTCTATGGTGTTGGCTTCTACAGTTTGCAAGATACTCTGTGGGATTTTAAAGGAAGACACTACTTTAACTCTTGCACCATAGAAGGTGCTATGGATTTCATCTTTGGTGCTGGTCAATCTTTATATGAGAGCTGTAGCATATCAGTTCGTGAAGCGTATCCAGGTAAAGCAATTATTGGTTTCATCACAGCGCAAGGGAGAATGAAAGCAGACGATGAAAATGGTTTTGTTTTCAAGAACTGCAACATCCATGGAGTTGGTAAAACATACTTGGGAAGACCATGGAGAGCTTATGCCAGAGTTCTTTTCTACAAAACAGTAATGTCTTCCATCATTCAACCACTAGGTTGGCAGCCATGGAATTCCAGTGCCGATGTAGGGGGAGTGGAATTCTCAGAGTATGAAAATATGGGTCCTGGTTCGGTTTTGTCTGGGAGAGTGAGCTGGTTGAAGAAATTGGATTCAACAACTCTGATGAAAATGACAAGTACAGAATTCGTGGACCATGAAGGTTGGCTCAAGACTCATCACATGTTATAA 1107 0.4119 MFLALSSIVTLFLLASNEAVLAHTHYSHTHHYHRHYHHHHRRNHHAHDHDHDHSHHSQKQFHDKAAPSQRIITVDQSGNADFSKIQSAIDSVPSNNKQWIYINVNAGTYREKLKIPEDKPYIVLKGMGKDKTFVEWDDHDSSAQSPTFLTMANDIVVKTISFRNSFNDPKKGNPMTPAVAAMISGDRSSFYGVGFYSLQDTLWDFKGRHYFNSCTIEGAMDFIFGAGQSLYESCSISVREAYPGKAIIGFITAQGRMKADDENGFVFKNCNIHGVGKTYLGRPWRAYARVLFYKTVMSSIIQPLGWQPWNSSADVGGVEFSEYENMGPGSVLSGRVSWLKKLDSTTLMKMTSTEFVDHEGWLKTHHML* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1385 368 Pfam Pectinesterase 72 357 IPR000070 GO:0030599|GO:0042545
Vra11g1385 368 PANTHER PECTINESTERASE 10-RELATED 61 365 - -
Vra11g1385 368 MobiDBLite consensus disorder prediction 34 49 - -
Vra11g1385 368 Gene3D - 66 368 IPR012334 -
Vra11g1385 368 MobiDBLite consensus disorder prediction 34 67 - -
Vra11g1385 368 SUPERFAMILY Pectin lyase-like 66 364 IPR011050 -
Vra11g1385 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1385 Vra-Chr11 16836057 16838348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1385 70 311 Carbohydrate Esterase AT2G19150 42.387 1.61e-71 223