Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1382 ATGGAAAATGGAAACAACAATGCATTGGCACTTCAGAACACGCACGTCAAACTTCTCGCCTTCGATCTCCTATCCTTGACACAATTTCCTTTCCGTTCTCCCGACGCCGCGACGTCGTTTTTCCGCAGAGGAATCCAAATCTCGCGCGTCGAAACCCTTGGCACTGTCACCCTGCGTCACCTCAAGCCCGAGAGGCTCCTCCGCTTCGCCATTGACGATGGCACCGGGTGCGTCCCCTGCGTGCTGTGGCTTAACGACGCCAATTCCCCCTCCGTCGTGCGCCGCCGCCGCCACGAGCTCGCCGCGCGCTTCGTCGAAGTGGTGAAGTTTGGAGCGGTTGCGAGGGTGAGGGGCAGACTGAGCCGGTACAAAGGCGGTGTGCAGGTGACCGTGTCGGACGTGGTGACGGAGAGAGATCCGAACGCCGAGATCTTCCACCTCCTGGACTGCATCAGGTTAATCTCTTCGTCTTTAAGAGACGGTGAAAGAGATGAGTCTCTTCGTCCTTGA 510 0.5804 MENGNNNALALQNTHVKLLAFDLLSLTQFPFRSPDAATSFFRRGIQISRVETLGTVTLRHLKPERLLRFAIDDGTGCVPCVLWLNDANSPSVVRRRRHELAARFVEVVKFGAVARVRGRLSRYKGGVQVTVSDVVTERDPNAEIFHLLDCIRLISSSLRDGERDESLRP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1382 169 PANTHER REPLICATION PROTEIN A-RELATED 10 153 IPR040260 -
Vra11g1382 169 Pfam OB-fold nucleic acid binding domain 64 134 IPR004365 GO:0003676
Vra11g1382 169 PANTHER CST COMPLEX SUBUNIT STN1 10 153 - -
Vra11g1382 169 SUPERFAMILY Nucleic acid-binding proteins 40 152 IPR012340 -
Vra11g1382 169 Gene3D - 6 160 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1382 31 155 Core DNA Replication Machinery Family AT2G24490 28.000 1.05e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1382 K23312 - gmx:112997612 242.276