Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1376 ATGAGTTATTTGGCACACTTGTTTGGCATCATAGCCTTCATCCTCTTGCTCATCTGGTTGTTGCATTATCGTGAAGGAATTGAGTATGATTCAAACAATGGATTACGTGTCTTCAATGTTCACCCATTTCTGATGTATAGCTTCATCTTTCTTGCTGGTGAAGCTATTTTGGCATTCCAAACCATACCAAGTGAAAGGAAAACAAGAAAGTTTGTTCATATGACACTGCATTTGGTTGCCCTAGTTCTTGGCATTATTGGGTTAAGTGCTGTTTTCAAGTTCCATGATATGCGTCATATTCCCAACCTTTATAGCCTCCATTCATGGATTGGCATTGCCACCTTTTGCTTGTTTGGACTCCAGTGGGTTTTTGGTTTGGTTGTGTTCATGCTTCAAGCAGCATCAGCCCCAACAAGAGCAAAGGTGCTTCCATGGCACAAAGTTGGTGGAAGAGCACTGATGTTCATGGCAGTGTGTGCTGCTGAAACAGGGTTGATGGAGAAGACCAGTTTCTTAACTAATTTAGGACTGCTGAAGCCTCATCACCGTGAATCCAATCTCATCAACTTCACCGGTCTTGCCATTCTCTTGTTTGGAGTTTTTGTTAACTTTTCTGTTGGATTCTCACACCATTAA 636 0.4182 MSYLAHLFGIIAFILLLIWLLHYREGIEYDSNNGLRVFNVHPFLMYSFIFLAGEAILAFQTIPSERKTRKFVHMTLHLVALVLGIIGLSAVFKFHDMRHIPNLYSLHSWIGIATFCLFGLQWVFGLVVFMLQAASAPTRAKVLPWHKVGGRALMFMAVCAAETGLMEKTSFLTNLGLLKPHHRESNLINFTGLAILLFGVFVNFSVGFSHH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1376 211 Gene3D - 1 209 - -
Vra11g1376 211 SMART 561_7 40 165 IPR006593 -
Vra11g1376 211 PANTHER CYTOCHROME B561-RELATED 2 209 IPR043205 GO:0016491
Vra11g1376 211 ProSiteProfiles Cytochrome b561 domain profile. 4 207 IPR006593 -
Vra11g1376 211 CDD Cyt_b561_ACYB-1_like 31 172 - -
Vra11g1376 211 Pfam Eukaryotic cytochrome b561 40 171 IPR006593 -
Vra11g1376 211 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 2 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1376 Vra-Chr11 16741514 16743684 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1376 2 211 Chloroplast and Mitochondria Gene Families AT1G14730 51.659 4.23e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1376 K08360 - gmx:100777650 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1376 11 16741514 16743684 Vra11g1376 11 16741514 16743684 ECH