Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1373 ATGGGTGGTGGGTTTCAAGTTGGAGCAGCTTCAATTACCATAGTTGCTCATTTGTTGTTCATAGCAATAACAAGCCTTTTACTAGTTTGGTTGCTACACTTCCGAGAAGGTGTTGCCTTCTTCAGCTCTTCCAACCCAACCAAGATTTTCAATCTCCATCCACTTCTAATGGTGATTGGATTCATTTTAGTTGGTGGAGAAGGTATGATGATATACAAGTCTGTGGCTAAAAAAAGGAGGTCAGTGAAAGTGATTCACCTGNTATTACATCTGGTAGCTATGGTGGCTGGAATTCTAGGGATCATAGCAGTTTTCAAATCAAAGAAAGAAGTTGGTCTTCCTAATATGTATACATTACACTCTTGGCTAGGCATGTCAGCAATATGCCTATTTGGTTTACAGTATATCATAGGGTTCTTCTCTTATTTCTTCCCTGGTGCAGAAATGCATACTAGAGCTTCCCTTCTGCCATGGCATAGGTTTGTGGGCATGGCCATATTCCTTCTTGCAGTTGCCACAGCTGAGACTGGTTTACTTCAATATTTTCAGTTTTTAAACCTTTTTCGTAGCCAAGAGGCTCTCATAGTCAATTTCACTGCTCTCTTGCTCTTCCTCTATGCTTTCTTTGTTGCTCTCTCTGTCACTCTCCCAGCAAATTATTCCTAA 666 0.4069 MGGGFQVGAASITIVAHLLFIAITSLLLVWLLHFREGVAFFSSSNPTKIFNLHPLLMVIGFILVGGEGMMIYKSVAKKRRSVKVIHLXLHLVAMVAGILGIIAVFKSKKEVGLPNMYTLHSWLGMSAICLFGLQYIIGFFSYFFPGAEMHTRASLLPWHRFVGMAIFLLAVATAETGLLQYFQFLNLFRSQEALIVNFTALLLFLYAFFVALSVTLPANYS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1373 221 Gene3D - 5 220 - -
Vra11g1373 221 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 217 - -
Vra11g1373 221 Pfam Eukaryotic cytochrome b561 52 181 IPR006593 -
Vra11g1373 221 ProSiteProfiles Cytochrome b561 domain profile. 15 215 IPR006593 -
Vra11g1373 221 CDD Cyt_b561_ACYB-1_like 43 186 - -
Vra11g1373 221 PANTHER CYTOCHROME B561-RELATED 6 217 IPR043205 GO:0016491
Vra11g1373 221 SMART 561_7 52 178 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1373 Vra-Chr11 16695688 16696691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1373 6 215 Chloroplast and Mitochondria Gene Families AT4G25570 41.121 8.52e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1373 K08360 - gmx:100785824 346.28