Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1370 ATGTTTCCAAGAGAGAATCATAGTAACGGCTATGAGCAGGTGGGTGGCATGGATCACACCCATTCCCACATCCACAGAGAGCGAGTCCGTCGCGGCACTCGCAGGTTACGTGGCTCCTCTTCCTCTCCATCTCTTAGGGTTTTCGACCAATCGCAACCGAACCACCACCGACCTCCCTGCACTGATTTCGACGTCGCCTACTTCCATTCCTACGCTCACCTCGGTATCCACCAGGAGATGATAAAGGATCGCGTGCGTACTGAAACTTACAGGGAAGCAATCATGCAGCACCAGAGTTTCATTGCAGGCAAAGTTGTGGTTGATGTCGGATGTGGTACTGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAGGTTGTGAAAGCCAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTCGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCGGAATGGATGGGCTATATGCTTCTATATGAGAGTATGCTTGGAAGTGTTATTAATGCTAGAGATCGATGGCTCAAACCTGGAGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACGCATACGGACAGATACAACGACAGTGTTGACTTCTGGCGCAATGTTTATGGAATTAACATGTCTGCCATGGTACCATTAGCTAAACAATGTGCATTTGAAGAACCTTCCGTAGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATGTGGTAAAGTACATCGATAGTTATTCTGTTACCATCAACGAGTTAGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTCGATGTTGAATTTAATGGGAATGCAATAGTATCAACCAATTACAATTCAACAACTTCATTTATTGACAATCATCAGATGAATGGTAGTCAGAGGAAAAAGCGAACAAATCCAAATGAAGCACTGGTCCTGTCCACTGCGCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCCATAGAGCTGGAACAAGATCAACTAATTGAAGGTTTAGTGACATTGTCGCAAAGCAGAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGCATGTGAAAGAGTCTGTTATGAGATGA 1248 0.4367 MFPRENHSNGYEQVGGMDHTHSHIHRERVRRGTRRLRGSSSSPSLRVFDQSQPNHHRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTETYREAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSATLYMAPVTHTDRYNDSVDFWRNVYGINMSAMVPLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTINELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGNAIVSTNYNSTTSFIDNHQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGLVTLSQSRENARFMNIHLEYTSGGRSHVKESVMR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1370 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 405 IPR029063 -
Vra11g1370 415 Gene3D Vaccinia Virus protein VP39 61 206 IPR029063 -
Vra11g1370 415 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 54 412 IPR025799 GO:0016274|GO:0018216
Vra11g1370 415 MobiDBLite consensus disorder prediction 1 56 - -
Vra11g1370 415 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 64 415 IPR025799 GO:0016274|GO:0018216
Vra11g1370 415 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 177 - -
Vra11g1370 415 CDD AdoMet_MTases 106 205 - -
Vra11g1370 415 Gene3D - 208 414 - -
Vra11g1370 415 PANTHER BNAC03G41340D PROTEIN 54 412 - -
Vra11g1370 415 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1370 Vra-Chr11 16668742 16683263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1370 67 415 C2H2 Transcription Factor Family AT3G12270 36.538 6.73e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1370 K11437 - gmx:100809174 724.931