Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1349 ATGGAGTGTCTCTTGGGTTTTGTAACTTCTTTTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGTTGCTTTAAAAATTTCGTCAAAAGACTTGAAGAAGAAGAGAGCAATTTGATTATAACGAAAGATAGTGTCCAAAAATTTGTTACACATGACAAGAAACAAGCGAGAAAGCCCAGTGAAATTGTGGACAAGTGGTTGGAAGATGCTATCAATGATGTACACAATGTAAATCAGTTGCTGGAAGAGGCAAGAACAAAAAAACATTGTTGCTTTGGGCACTGTCCAAATTGGATTTGGCGATACCATGTTGGAAAAAAGTTAGCAAATAAAACTATGGACCTCGAAAAGTTCATTGAAAAGGGTAGAAAATATGTGCCATTTGACCGCATCGCTACGCTTCCTTCAAACACTCTTGATATGCTTTCAGAAAAATGCATGAATTTTGAGAGTAGACAATATGCTTATGAGCAACTACTGGATGCAGTGAAAAATAGTGATGTTTCCATGATTGGATTGTATGGGATGGGAGGTTGTGGTAAAACAACATTAGCAATGGAGGTTAGAAAATTAGTAGAAGCAGAGCATATTTTTGAAAAAGTTCTTTTTATAGCTGTTTCTAGTACCGTGGAAGTTCGGAGGATTCAAGAAAAAATAGCAAGTTCACTACAATTTGAATTTCCAGAAACCGAAGAAATGCAGAGAGCCCAAAGATTGTGCTCAAGATTAACTCAAGAGAAAAATATTTTTATAATTCTAGATGATGTGTGGGAAAAGCTTGACTTTGGTCGTATTGGGATTCCTTCTTTTGAACACCATAAAGGCTGCAAGATTTTCATTACCACTAGATCAGAAGCAGTTTGTACTTTAATGGATTGTCAAAGAAAGATTTACTTGCCAATTTTAACGGATGAAGAAGCATGGACTCTTTTCCAAAATAAAGCACTTATATCAGAAGGCACCCCTCATACCTTAAAGAATCTGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTTGTAGTTTGAAGGGAAAAACTGAGACAATATGGAGTGTTGCATTAAATAAATTAAGACGTTCCAAGCCAATAAATATTGAAAGAGGTTTGATTGATCCCTACAAGTGTCTACAACTGAGCTATGATAATTTAGATACTAAAGAAGCTAAATCACTTTTCCTGTTGTGCTCTGTGTTTCCTGAAGATTCTGAAATTCAAGTTGAAATTTTAACAAGATGTGCAATAAGATTAGGTGTAGTTGGAGAAGTTGACTCATATGAAGAGGCAAGGAGTGAAGTGATTGCAGCTAAAATTAAGCTTGTTAGTTGTTGTTTATTGTTGGATGGAGATAATGAACGTGTCAAAATGCATGACATAGTTCGTGACGTGGCCCACATAATAGCACAAAATGAGAATAAGAAGATCAAGTGTGAAGTGGAAATAGATGTTACAGTGGAACAAAATTCTGTAAAATATCTATGGTGTTCCAAATTTCCAAATGATTTGGATTGCTCTAATCTTGAGTTTTTATGCTTACATACAATTATGAAAGGATTTGAAGGAATTTTCAAAAGAATGGGAAAGCTCAAAGTTTTGCTTCTTGGCAACGATGAGGATGAAAAAACTCCATTGTCAACTACATCTTTGAAAACATTAACAAATCTTCGAGATCTATTCATTTTCAATTTTGAATTGAGCGACTTCTCATTTTTAAGCGGTATGAAGAATCTTCAAACTCTCTCGTTATATGATTGTTCACTGCCTTCATTTCCTGAATTTCAAACCGATGTTGCAATTACACTAAAATTGTTAGAGTTGAATGAATGTTACATTAAAGTGAAGAATTTTGAAGTGATGAAGAGAATCCCTCTTTTGGAAGAGTTGTACATTATTGATATTACAGGAGAATGGTATGCTAACAGTGAAGACAATATTGAATTCTTTAAGACGTTTAGCATTCCCAAAACACTACAAAGGTATGGAATTGTATTAGGGTCTGATAACTTTTATCATTATAATGATAGAGATATTTATATTCATAGCAGAACTTTATTACTTAACCATTTTGACATATCAAAAAATGAGGTAATAAAGGGTTTGGCAAAAAAAGCAAAGGATCTATTTGTACGAAATATTCATGGAGGTGCAAAAAATATGATCCCTGATATATTTGAAATTGAAGGAGGAGGTTTGAATGATTTGAATACGTTGGAGATACGTGATTCTGCAGGGATAAAGTGTTTGATTGACACTCGTAGTCACTCGAGTGAGGTGGTAACTCTCTTCTCCAAGTTGCATACGTTGGAAATGAAGCGCATGGAAAATCTAAAAGCTATTTGGCATTGTTTTCTTCCTGCCAATGGACCTTTTGAGAACTTAGAGAACTTGTATTTAAGTAATTGTCCAAGGTTGACATTTCTCTTCACATATGTGGTTGCTCGAAATTTGGTACAATTGAAAATATTAAAAATATCAGGATGTGATGAACTGAAGCATATATTAACATATGATGAGAAAAGTCAAGATGAATTCACCACAGGGCATCCTATACAAATCTTCCAGAATCTGCTAGATGTAAAGATAAAAAGGTGTCGAGAACTAAAACATATATTCCCAGCCAACATTGTTGGAGGCTTAACTCAATTGAAAGTTCTCGAGATAAGAGAATGTGACATGCTAGATCAAATAATTGGAGATATTGTTCCATTAACAGAGCAGGATAGAAAACAAGAACTTGATGAAATCGTTGAGGAAGGAACTCTTCCCAGTCTTACAAGTCTTAAGATAACATATTGTGGAAAGTTAGACTCAATTTTTACAGCATCTAAAGCTAAGACCTTGACTTCTTTGGAAGAATTGTTCATAGAAGACTGCAAAAGTTTGAAGGATATAGTAACTCACGAAAGAGTCAATAAAAATCAGGAGGAAAGCATTGTTGAGGATGAGCATATTAGTGAATGTGACTCATTGGAAGTAGTCTTTCCAAATTGGACAGGTCCCAAGAATTCACTTACTCTCCAACATCTTACCATATTAACAATATGGAAATGTGGAAATATGGAAGTAATCTTTCCAAAGTCTGTTGTAAGATGCTTACCAGAGTTAAAGAAAGTAACCATAAGAGAGTGCATGGAATTGAAGCAGATCATCGAAGAAGACGAGTCCAATCTTCTTTCCATAGATGGAGGCTTTGAAGTAGAGGAGATTATTGGATGTGATAAAGAAGCTTCAAAGAATTATTTTGCCTTCCCAAATCTTGAAAAACTAGAAATAATTGAATGTGAGAAATTGGAAGTAGTCTTTCCAAAGTCTATTTTAAGATGCCTACCAAAGTTGAAGCTTTTGAAGATAAGTCAATGCAAAGAATTAAGTCAAATCATTGAAGAGGATAAAAATTTGTCTAATATTCTTTCTCCTCAACCATGCTTCCCAAAACTAGAAGCATTGCATGTTGATGATTGTCACAAGTTGAAAAGATTATTCTCTGGATCTGCTTCTAATGACCTTCCCAATCTTCATCTTCTGGCCATAAATGGAACATATGAACTAGAAGAGCTTGTTGGATGTAAACAAGGAAAGACTAAAGTTGAGCTTCCAAGACTCAAACTTTTAATATTTATGCATCTTCCAAACTTCCGTCAGGAAATTGAATTGCGTGATTTAAAGAATTGCATTATCTACAAATGTCCCAAACTCTCTTTGACTTCAACAACTACTCTTGAGAAGCTCCTTGAAGATTTTCCTCACAAAGATTTCATACACACTGAACTTGGTCCTTCGGAACTTAAAGGCATAGTAAGATCCATATATGAATATTCAACTTTTAATGGTAGCAGTGAGTTCACTTCATCACAGGAGATTGAGGTTGTAGGAAATGAGAACATTGAAGAGGGCCCTTTAGTAGAAGGTTCTAAGACAAAATCCTCATCCACTGGTGTTGAAGACATTGGCATTGGAAGTGGCGTTGAAGACATTGGCATATATGAAGATTCAACTAGTGGTAGCAGTGAATTGACTTCATCACAGGAGATTGAGGATGTAGGAAATGAGAGCATTAAATCTTCATCCACTGGAGTTGAAGACATTGGCATTGGAGGTGCAACTCACATTGAGTCTGGTGGCGAGGACATACTTGCACTAGATTCCAAGGTAGTTGAACAAGATGATAAGATGAATGAAGGCAAGCCAGGAATAGTGGCAAGCCAAGGAATCCAAGTACAAGAAGGGTTGAACCTTTTGCATAAACAAGATGGAACAGATGTTGTTCCTAACAACAACATTGACATTTCTTCAGATATCTGTACAAGATTGGGAGCATATAAACATTTTGCTGATCTGGATGATGCACAGATTTCTCTTCTGGTGGAGGCAATAACAACATATCCTCATCTCTGGAATGCTTCCAAGAAGTTTAGTGAGCGTTTTCAAGCTTGGAGGTTGAAAATTTTGGCAGATATGTTGTTGTTCCTCCAGAAGGAAAGTGTGGATAGTATTATTCCTCAAAGAGAAAAAGAGTTCCATAAACTATGTGAAGAAGCTATTGAAATTGGATTTGAGAGTTCATGGGTAGAGGAAATGCGTCAACGTGTTGTGGCGAGGGATCCTAAGTTGGAAGAGGACATTGCTAAGAGACAAATGGATGAGAATTCTAAGAGCAATTTAAGTTTGTTAAACAGGTGTAGTAGTGGGGACGTTGTTGAAGAAGGCGATGGGCCTAAGATTAGATTGGAAGAAGGTTCTGACTTGGTTGATAAAGAAGGTGAAGTAGGTGTTGTTTCTAATGACCACATTTTGGCTCCGAGAAATGAAGAACCAGAGCATGAATTTGTTGCAGAAGTTTCCACTTCAGAAATACCAAGAATAGCAACATCATTAACAAATTCGCAAACAGTTGAAAAGCAAACTCCAAGTCATTTGTATATTCCTGTACGTGAAACATCCTCAAATGCTTTGGTGGATACAAAGCAGACTAGTGAACCGTGTCTGATGAAGCAGAAAAAACCACTTGGTGAAATTCCTAAGAGTATTGATCAAGTTGTTGAAGAGGAAACCATAGCAAAGAACACCGATATGGCAGCTTCATCAATTCTTTCCGACTCCACCACCTCTAAGTTGGATACAACAGTTACTTTACAACGTAAATCACATCCACATAGTGAAATTAGGAGCAGCCAAAATGTGGTACGCATTACTAAAGAAAGTGAAGGCCATCTTGAACTCATTCAAGACTTTGGGGGCAATGATATGATTGCAATTTCTTTGGGGAAAGAGGGTGATGATAATATAGTTGTAAAGACCCTTGTTGAGCTGGAAAACTATCTCAAGATGTCTCTCAAGGACATAGTTAGTTCTGAGACTAACGCCCTCCGTCTTTTTTCTACTCTTAATTTCCTGTCCAACCTTCCTTTCAAAGATGTGACTCTATCAGATCGACTCAAACACATTATAAAGACTATGCACCAACACTTCCCAACCATTCTATGCTCCTTTAAGCAACGCTTTGCTACCACTGACAAGTTGGCAGAACTTGAAGCTCGTCAGAATGAGGTGGCCATTAAAATTTTTGAGGCTGAGAATTTCAATGATGAAGCTCGACTGAAGGAAGTGGTTTTGAAGGAAGAAATCATTAGGTTGAAGGAAGAAATAAAAGTTTGTGAGGCTGCCTTATCATCTCTGGATGAGGGAAAAAATAAATGCATTGTGGAAACTATAAGGTACAAAAAGGAGCTTGAAAATGTGAGAAAAAACAAATCTCAAATGGTGAAAGATCAAAGAAAAGTTGAACAAGAATTGTTTGAAGTTGCTTATAAATGGTCAGTTCTCTGTAGTGAATATGAGCTCAATCGAATTGCTGCAAGAAATCCCTCCTGA 5907 0.363 MECLLGFVTSFSRDLVCGALNQLRYPCCFKNFVKRLEEEESNLIITKDSVQKFVTHDKKQARKPSEIVDKWLEDAINDVHNVNQLLEEARTKKHCCFGHCPNWIWRYHVGKKLANKTMDLEKFIEKGRKYVPFDRIATLPSNTLDMLSEKCMNFESRQYAYEQLLDAVKNSDVSMIGLYGMGGCGKTTLAMEVRKLVEAEHIFEKVLFIAVSSTVEVRRIQEKIASSLQFEFPETEEMQRAQRLCSRLTQEKNIFIILDDVWEKLDFGRIGIPSFEHHKGCKIFITTRSEAVCTLMDCQRKIYLPILTDEEAWTLFQNKALISEGTPHTLKNLGRLISNECKGLPVAIAAVACSLKGKTETIWSVALNKLRRSKPINIERGLIDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDSEIQVEILTRCAIRLGVVGEVDSYEEARSEVIAAKIKLVSCCLLLDGDNERVKMHDIVRDVAHIIAQNENKKIKCEVEIDVTVEQNSVKYLWCSKFPNDLDCSNLEFLCLHTIMKGFEGIFKRMGKLKVLLLGNDEDEKTPLSTTSLKTLTNLRDLFIFNFELSDFSFLSGMKNLQTLSLYDCSLPSFPEFQTDVAITLKLLELNECYIKVKNFEVMKRIPLLEELYIIDITGEWYANSEDNIEFFKTFSIPKTLQRYGIVLGSDNFYHYNDRDIYIHSRTLLLNHFDISKNEVIKGLAKKAKDLFVRNIHGGAKNMIPDIFEIEGGGLNDLNTLEIRDSAGIKCLIDTRSHSSEVVTLFSKLHTLEMKRMENLKAIWHCFLPANGPFENLENLYLSNCPRLTFLFTYVVARNLVQLKILKISGCDELKHILTYDEKSQDEFTTGHPIQIFQNLLDVKIKRCRELKHIFPANIVGGLTQLKVLEIRECDMLDQIIGDIVPLTEQDRKQELDEIVEEGTLPSLTSLKITYCGKLDSIFTASKAKTLTSLEELFIEDCKSLKDIVTHERVNKNQEESIVEDEHISECDSLEVVFPNWTGPKNSLTLQHLTILTIWKCGNMEVIFPKSVVRCLPELKKVTIRECMELKQIIEEDESNLLSIDGGFEVEEIIGCDKEASKNYFAFPNLEKLEIIECEKLEVVFPKSILRCLPKLKLLKISQCKELSQIIEEDKNLSNILSPQPCFPKLEALHVDDCHKLKRLFSGSASNDLPNLHLLAINGTYELEELVGCKQGKTKVELPRLKLLIFMHLPNFRQEIELRDLKNCIIYKCPKLSLTSTTTLEKLLEDFPHKDFIHTELGPSELKGIVRSIYEYSTFNGSSEFTSSQEIEVVGNENIEEGPLVEGSKTKSSSTGVEDIGIGSGVEDIGIYEDSTSGSSELTSSQEIEDVGNESIKSSSTGVEDIGIGGATHIESGGEDILALDSKVVEQDDKMNEGKPGIVASQGIQVQEGLNLLHKQDGTDVVPNNNIDISSDICTRLGAYKHFADLDDAQISLLVEAITTYPHLWNASKKFSERFQAWRLKILADMLLFLQKESVDSIIPQREKEFHKLCEEAIEIGFESSWVEEMRQRVVARDPKLEEDIAKRQMDENSKSNLSLLNRCSSGDVVEEGDGPKIRLEEGSDLVDKEGEVGVVSNDHILAPRNEEPEHEFVAEVSTSEIPRIATSLTNSQTVEKQTPSHLYIPVRETSSNALVDTKQTSEPCLMKQKKPLGEIPKSIDQVVEEETIAKNTDMAASSILSDSTTSKLDTTVTLQRKSHPHSEIRSSQNVVRITKESEGHLELIQDFGGNDMIAISLGKEGDDNIVVKTLVELENYLKMSLKDIVSSETNALRLFSTLNFLSNLPFKDVTLSDRLKHIIKTMHQHFPTILCSFKQRFATTDKLAELEARQNEVAIKIFEAENFNDEARLKEVVLKEEIIRLKEEIKVCEAALSSLDEGKNKCIVETIRYKKELENVRKNKSQMVKDQRKVEQELFEVAYKWSVLCSEYELNRIAARNPS* 1969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1349 1968 Gene3D - 306 397 IPR042197 -
Vra11g1349 1968 PANTHER - 862 910 - -
Vra11g1349 1968 PANTHER - 28 845 - -
Vra11g1349 1968 PANTHER - 932 1147 - -
Vra11g1349 1968 Gene3D Ribonuclease Inhibitor 697 855 IPR032675 -
Vra11g1349 1968 Gene3D Ribonuclease Inhibitor 856 993 IPR032675 -
Vra11g1349 1968 Gene3D Ribonuclease Inhibitor 994 1147 IPR032675 -
Vra11g1349 1968 SUPERFAMILY L domain-like 460 978 - -
Vra11g1349 1968 MobiDBLite consensus disorder prediction 1342 1372 - -
Vra11g1349 1968 Coils Coil 72 92 - -
Vra11g1349 1968 Coils Coil 1922 1942 - -
Vra11g1349 1968 Gene3D Ribonuclease Inhibitor 492 671 IPR032675 -
Vra11g1349 1968 PRINTS Disease resistance protein signature 175 190 - -
Vra11g1349 1968 PRINTS Disease resistance protein signature 248 262 - -
Vra11g1349 1968 PRINTS Disease resistance protein signature 341 355 - -
Vra11g1349 1968 PRINTS Disease resistance protein signature 826 842 - -
Vra11g1349 1968 SUPERFAMILY RNI-like 1016 1217 - -
Vra11g1349 1968 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 862 910 - -
Vra11g1349 1968 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 28 845 - -
Vra11g1349 1968 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 932 1147 - -
Vra11g1349 1968 Coils Coil 1873 1893 - -
Vra11g1349 1968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Vra11g1349 1968 Gene3D - 142 303 IPR027417 -
Vra11g1349 1968 MobiDBLite consensus disorder prediction 1342 1370 - -
Vra11g1349 1968 Pfam NB-ARC domain 163 394 IPR002182 GO:0043531
Vra11g1349 1968 CDD AAA 160 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1349 Vra-Chr11 16461034 16473483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1349 172 645 WRKY Transcription Factor Family AT5G45050 23.883 3.69e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1349 - - vra:106752470 2412.88