Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1333 ATGATCGATCTCTTTGAATCATTTTCCTCTGCACAAGCACACACTATGTTCCCTCTTACAAGAAACAAAACACACTACCTCACTCCCACACCGAAAAAATCTACCTTGCTCTCTCTCATTCTCTCTTCAACCATGTCTTCTTCCTCCGATTCCGACCACCGTCCGCTGAGAGAAATCCCTGGAAGCTACGGCCTCCCATTCTTCGGACCCATAATCGACCGCCACAACTACTTCTACCACGAGGGCCGCGACAAGTTCTTCGCTTCCAGAATCAGCCGCCACAGCTCCACCGTCATTCGCACCAACATGCCGCCGGGACCCTTCATCTCCTCCGATCCTCGTGTCATTGCGCTGCTGGATGGGGCCTCCTTTCCTGTACTGTTCGACAACAATAAAGTGGAGAAGTTCAACGTCCTCGACGGCACTTTCATGCCCTCCACGAAGTTCACCGGCGGCTTCCGCGTCTGTGCCTACCTCGACACGACGGAGCCCAACCACGAACTCATCAAGGACTTCTTCCTCCAAGCTCTGGCCCGACGAAAAGACTCCTTTCTCCCACTTTTTCGAAACTGTCTCCGTGAATCCTTTGCAGAGATCGAAGATCAGCTGAGCAAGAAGACGGAAGCAGGTTTCAACGACGTGTTTAGCCATGCTTCCTTCAACTTCATGTTCAGGCTGTTCTGCGATAACAGAGACCCTTCCCATACTAACCTCGCTTCCAAGGGACCGAAGCTGGTGGACACGTGGCTTCTATTTCAACTGGCCCCACTTGCGACGTTAGGTCTCCCAAAAATCTTCAACTACGTCGAAGACATCCTCATCCGCACGCTCCCCTTCCCCGCGTGTCTCACAAAGTCCGGTTACAACACTCTATACGAAGCCTTCAGAACGCACGCGACCACGCTCCTAAACGAGGCCGAGAAGCTGGGCCTGGACCGGAACGAGGCCTGCCACAACGTGGTTTTCACCGCCGGTTTCAACGCCTACGGCGGGCTCAAGAACCAGTTCCCCGTGCTCCTGAAGTGGGTGGGCCTCGCCGGCGACAAACTCCACGCGGACCTCGCGAGTGAAGTTCGGGGCGTGGTGAGCGCCGAAGGAGGAGTCACGTTAAACGCGCTGGAGAAGATGCCGTTGGTGAAATCCGTTGTGTACGAGGTGATGCGGATCGAACCCGTGGTGCCTTACCAGTACGGGCGCGCGAGGGAGGACATGGTGGTGCGTAGCCACGACGCATCGTTCGAGGTGAAGAAGGGGGAGATGCTGTTCGGATACCAGCCGTTCGCCACGAAGGATCCTAGGATCTTCGAGGATGCGGAGGTTTTCGTGGCGCGTAGGTTTGTGGGCGAAGGGGAGAAGATGCTGAAACACGTGCTGTGGTCTAATGGGAAGGAGACAGAGGAGGCTTCGGTCAGTAATAAGCAGTGTGCGGGGAAGAATCTGGTGGTGGTGCTGTGCAGATTGCTTCTGGTGGACTTCTTCTTACGATACGACACGTTTCAGTTTGAGTTTAAGCAATCTGGGTTTGGTCCTAGTATTACCATTAAGTCCCTTACCAAGGCTTCTACCTTGTTCTGA 1575 0.5441 MIDLFESFSSAQAHTMFPLTRNKTHYLTPTPKKSTLLSLILSSTMSSSSDSDHRPLREIPGSYGLPFFGPIIDRHNYFYHEGRDKFFASRISRHSSTVIRTNMPPGPFISSDPRVIALLDGASFPVLFDNNKVEKFNVLDGTFMPSTKFTGGFRVCAYLDTTEPNHELIKDFFLQALARRKDSFLPLFRNCLRESFAEIEDQLSKKTEAGFNDVFSHASFNFMFRLFCDNRDPSHTNLASKGPKLVDTWLLFQLAPLATLGLPKIFNYVEDILIRTLPFPACLTKSGYNTLYEAFRTHATTLLNEAEKLGLDRNEACHNVVFTAGFNAYGGLKNQFPVLLKWVGLAGDKLHADLASEVRGVVSAEGGVTLNALEKMPLVKSVVYEVMRIEPVVPYQYGRAREDMVVRSHDASFEVKKGEMLFGYQPFATKDPRIFEDAEVFVARRFVGEGEKMLKHVLWSNGKETEEASVSNKQCAGKNLVVVLCRLLLVDFFLRYDTFQFEFKQSGFGPSITIKSLTKASTLF* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1333 524 SUPERFAMILY Cytochrome P450 53 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1333 524 PANTHER CYTOCHROME P450 26 47 521 - -
Vra11g1333 524 PANTHER FATTY ACID HYDROPEROXIDE LYASE 47 521 - -
Vra11g1333 524 Pfam Cytochrome P450 353 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1333 524 Gene3D Cytochrome P450 50 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1333 Vra-Chr11 16282330 16286001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1333 44 521 Cytochrome P450 AT5G42650 49.792 7.45e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1333 K01723 - gmx:100801764 824.313