Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1327 ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATGAAATTCTTGACAAGCCAACACACTGGACTCCTTCTATGCAGGCATATAACAATTCTGCGTCTACTCCGATTCCCTTTTTATATCAACACGCAGCTGGTTACATGCCTCTCTACATGTGGCCAAACCAGGCAAACAGCACAGTACTTCAATCTAATGTTTTGCAGGATCCAATGAAGCTCTCCAATAAACCTACAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATGGAAGCAAATCTTCGATACTGAAAAACAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCTTGTCACTGCTAATGATTTTCCTTCAACTAAGAAGCAACACTGTAATTTGGTGCTTGAAAATGCAAGCTCAATTCAACTGAATCAGGATTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTTGTGAAGTTGGAAGAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGGGAATCGGCTAGAAGATCAAGGATGCGGAAAGAGAGAGAATGTGAAGAGTTACATAAGAAAATGGAAATTCTTAAGGATGAAAACTCCATGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGTAATGAAAATGATGCCATAGAGGAAGAGCTGGTTAACATGTATGGAACAGAATCAATATCATATCTGCTGGCCATGAAGCCACGCTGA 888 0.3941 MGTQKSNMFDTAYNYLVPEDEILDKPTHWTPSMQAYNNSASTPIPFLYQHAAGYMPLYMWPNQANSTVLQSNVLQDPMKLSNKPTVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDGSKSSILKNNKDRVLCSEAYGNKGSLHEDLVTANDFPSTKKQHCNLVLENASSIQLNQDLETGLDAIGTNTELVKLEEDEIRRERKRQSNRESARRSRMRKERECEELHKKMEILKDENSMLTQRLKSLSEECLEICNENDAIEEELVNMYGTESISYLLAMKPR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1327 295 Coils Coil 221 276 - -
Vra11g1327 295 Gene3D - 211 266 - -
Vra11g1327 295 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 262 IPR004827 GO:0003700|GO:0006355
Vra11g1327 295 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
Vra11g1327 295 CDD bZIP_plant_GBF1 213 263 IPR045314 GO:0003700|GO:0006355
Vra11g1327 295 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 294 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vra11g1327 295 Pfam bZIP transcription factor 208 265 IPR004827 GO:0003700|GO:0006355
Vra11g1327 295 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Vra11g1327 295 MobiDBLite consensus disorder prediction 213 233 - -
Vra11g1327 295 PANTHER BZIP TRANSCRIPTION FACTOR 1 294 - -
Vra11g1327 295 SUPERFAMILY Leucine zipper domain 211 266 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1327 29 289 bZIP Transcription Factor Family AT4G36730 28.777 5.59e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra11g1327 bZIP_1 4.5e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1327 K09060 - gmx:102665715 451.825