Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1324 ATGACATTAGCAGAAAACACAAAAAAGAGACAAAGACAACCAAATCCTCATCTTTATCAAGTCTTAGTTCCCTCACCATTCTCTTCCATCACCATGGATTCTCAACTGCTTAATGTATCAGCTCTTTTCCTCTCCTTTCTCCTCTTCATGATTTTGGCACTTAAAATAGGGACCAATCTCAAGAAAACTCACTCATCTCCAAACATACCCCCAGGACCATTGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCAACTACACCACACAGAAAATTAAGAGACTTAGCCCAAATATATGGTCCCTTGATGCATCTCCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCNAGGCCTACAATTCTAGCTTCTGATATATTATCTTATCAATCCACAAATATAATTTTTGCACCCTATGGAAACTATTGGAGACAGCTACGAAAAATCTGCACAGTGGAGCTTTTCACCCAAAAACGTGTCAGCTCATTCCAGCCAATAAGAGAAGAAGTACTGACCCATCTTGTCAAAATGATCGATTCACATAAAGGCTCTCCCTTTAACCTCACTGAAGCAGTGCTTTCATCGGTATATAACATCATGTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAGGAATTCATATCAGCGATGAAAGAAGCCGTGGAAAGTGGATCGGGTTTTAACATAGGAGATCTGTTTCCTTCAGCTAAATGGCTTCAAATTGTTACTGGTTTGAGGCCTAAGCTCGAGAGACTGCATGGACAAGTTGATAGGATATTAGGAGACATCATCAGTGAACACAAAGAGGCAAAGTCCAAAGGCAAAGGAGGCCAAGGTGAAGCAGAGGAAGATTTGGTAGATGTGCTTCTAAAATTTCAGGATGGTAATGAAAGTAACAAGGATATTTGCTTAACTATTGACAATATCAAGGCTATAATCCTGGATGTGTTTGCTGCTGGAGGAGAGACATCTGCAACTACCATCAATTGGGCAATGGCAGAGATGACTAAGGATCCAAGAGTAATGAAGAAAGCAGAAGATGAGGTGAGAGAGGTATTCAATATGAAAGGAAGAGTAGATGAAGTTTGCATGGATGAACTCAAATATTTGAAATTAGTAGTGAAAGAGACCTTAAGGTTACATCCACCAGCTCCTCTTTTACTTCCAAGAGAAAGCAGAGAAGAATGTGAGATTAATGGGTATGATATTCCAGTGAAAAGCAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCTAAGTATTGGAGTGAAGCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTCTGTTGACTACAAAGGGAACAATTTTGAGTACATTCCTTTTGGTGCTGGAAAAAGAATATGCCCAGGCACCACATTTGGTTTGATAAGTGTTGAGCTAACACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCATGGGAATCAAAAATGAGGATTTGGACATGACTGAGCAATTTGGAGTCACTGTTAGAAGAAAAGATGACCTTTACTTGATACCTCTCACTTCTTCATCTTTTCTGGTAAGATAA 1629 0.3959 MTLAENTKKRQRQPNPHLYQVLVPSPFSSITMDSQLLNVSALFLSFLLFMILALKIGTNLKKTHSSPNIPPGPLKLPVIGNIHNLLSTTPHRKLRDLAQIYGPLMHLQLGEVFTIIVSSPEYAKEIMKTHDLIFASRPTILASDILSYQSTNIIFAPYGNYWRQLRKICTVELFTQKRVSSFQPIREEVLTHLVKMIDSHKGSPFNLTEAVLSSVYNIMSRAAFGMKCKDQEEFISAMKEAVESGSGFNIGDLFPSAKWLQIVTGLRPKLERLHGQVDRILGDIISEHKEAKSKGKGGQGEAEEDLVDVLLKFQDGNESNKDICLTIDNIKAIILDVFAAGGETSATTINWAMAEMTKDPRVMKKAEDEVREVFNMKGRVDEVCMDELKYLKLVVKETLRLHPPAPLLLPRESREECEINGYDIPVKSKVIVNAWAIGRDPKYWSEAERFYPERFIDSSVDYKGNNFEYIPFGAGKRICPGTTFGLISVELTLAFLLYHFDWKLPMGIKNEDLDMTEQFGVTVRRKDDLYLIPLTSSSFLVR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1324 542 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 122 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 SUPERFAMILY Cytochrome P450 70 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vra11g1324 542 PANTHER CYTOCHROME P450 71B11-RELATED 40 536 - -
Vra11g1324 542 Gene3D Cytochrome P450 55 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 Pfam Cytochrome P450 70 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1324 542 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 40 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1324 Vra-Chr11 16216621 16218630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1324 39 533 Cytochrome P450 AT3G26300 42.430 4.95e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1324 - - gmx:102665189 845.499