Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1322 ATGCACCCAAAGTTTCTTATCTGCATCAGCATAAACCAATATAAGAAGAGACAAGAAGCAAACTTTCTCAGAACTTTGGAACCCCTTTTTCTCACAATGGAGTTTCAACCACTTCACATGTTTGGCCTTGCAATATCCTTTTTCCTCTTCATGATTCTAGCACTCAAAATAGGGACCAATCTGAAGAAAACTGAGTCATCTCAAAAAATACCACCAGCACCATGGAAGCTACCTGTTATAGGAAACATACACAATGTTCTTTCAACTACACCACACAGAAAATTAAGAGACTTAGCCAAAATATATGGTCCCTTGATGCATCTCCAACTTGGNGAGNTCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTCAAAATTTAGCTTCTGATATAGTGGGTTATCAATCCACTGGTATTATTTCAGCACCATGCGGAAATTATTGGAGGCAGCTGAGAAAAATATGCACAGTGGAGCTTTTAACCCAACAACGTGTCAATTCATTCAATCCAATAAGAGAAGAAGAGTTCACCAATCTTGTCAAAATGATTGATTCACATAAAGGCTCGCCCTTCAACCTCACTGAAGCAGTGCTTTCATCAATATATAACATCATTTCAAGAGCTGCTTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCAGTGGTAAAAGAAAGCCTCACAGTTGCAGCAGGATTTCACATCGGAGATCTGTTTCCTTCTGTTAAATGGCTTGAACTTGTTAGTGGTTTCAGGCCAAAGCTTGAGAATCTGCATCAAAAATTTGATCGGATACTAGGAGACATCGTCAATGAACACATAGAAGCAAAGTCAAACGCCAGTGATGGCCATGTTGAAGCAGAGGAAGATTTGGTGGATATTCTCCTAAAATTCCAGGATGGTAATGATAGAAACCAAGATATTTGTTTAACAATTAACAATATCAAGGCTATAATTCTGGACATATTTGGTGCTGGAGGTGAGACATCAGCAACTACAATAAACTGGGCCATGGCAGAAATGATTAGGGATCCAAGAGTATTGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGGTTGATGAACTATTCATGGATGAACTCAAATATTTGAAATCGGTTGTAAAAGAGACCCTAAGGTTGCACCCACCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAAACATGTGAGATTAAAGGGTACCATATACCAGCCAAAAGTAAGGTAATTGTGAATGCTTGGGCAATAGGAAGAGATCCAAAGCATTGGACTGATGCAGAAAGGTTTCATCCAGAGAGATTCACTGATAGCTCAATTAGCTACAAAGGGATTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGTATCACCTTAGGTTTACTAAATGTTGAGCTGGCCCTTGCATTTTTGTTGTATCACTTTGATTGGACACTTCCAAATGGAACTAAAAGTGAAGACTTGGACATGTCTGAGAAGTTTGGAGTCACTGTTAGAAGAAAAGATGACCTATACTTGATACCACTCACTTCTAGTCCTTTCTTGGTACCATAA 1632 0.3903 MHPKFLICISINQYKKRQEANFLRTLEPLFLTMEFQPLHMFGLAISFFLFMILALKIGTNLKKTESSQKIPPAPWKLPVIGNIHNVLSTTPHRKLRDLAKIYGPLMHLQLGEXFTIIVSSPEYAKEIMKTHDLIFASRPQNLASDIVGYQSTGIISAPCGNYWRQLRKICTVELLTQQRVNSFNPIREEEFTNLVKMIDSHKGSPFNLTEAVLSSIYNIISRAAFGMKCKDQEEFISVVKESLTVAAGFHIGDLFPSVKWLELVSGFRPKLENLHQKFDRILGDIVNEHIEAKSNASDGHVEAEEDLVDILLKFQDGNDRNQDICLTINNIKAIILDIFGAGGETSATTINWAMAEMIRDPRVLKKAQAEVREVFNMKGRVDELFMDELKYLKSVVKETLRLHPPAPLLLPRECGQTCEIKGYHIPAKSKVIVNAWAIGRDPKHWTDAERFHPERFTDSSISYKGINFEYIPFGAGRRICPGITLGLLNVELALAFLLYHFDWTLPNGTKSEDLDMSEKFGVTVRRKDDLYLIPLTSSPFLVP* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1322 543 Pfam Cytochrome P450 71 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 41 537 - -
Vra11g1322 543 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 123 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 PANTHER CYTOCHROME P450 71B11-RELATED 41 537 - -
Vra11g1322 543 Gene3D Cytochrome P450 61 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 SUPERFAMILY Cytochrome P450 71 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1322 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1322 Vra-Chr11 16209924 16213406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1322 66 536 Cytochrome P450 AT1G13110 41.580 1.69e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1322 - - gmx:100814157 824.313