Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1321 ATGGATTATGAGTTACCTAAGATATTATCCTTTACCATGCCCTTTATTCTCTTCATCATTTTGGCACTCAAGAAAACTGAGTCATCTCAAAAAATACCACCAGGACCATGGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCATCTGCACCACACACAAAATTAAGAGACTTAGCCAAAATATATGGTCCCCTGATGCATCTCCAACTTGGAGAGATCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTTCATCAAGGCCTAAAATTCTAGCTTCTGATATATTGTGCTATCAATCCACTGATATTGTGTTTTCTCCTTATGGAAACTACTGGAGACAGCTACGAAAAATCTGCACAGTGGAACTTTTCACCCAGAAACGTGTCAACTCATTCAGACCAATAAGAGAATCTGAGTTCACCAATCTCGTTAAAATGATTGATTCTCATCAGGGATCTTCCATCAACCTCACTGAAGCAGTTCTTTCATCAATATATAACATCATTTCTAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCAGTGGTAAAAGAAGGAGCACTTGCTGTATCAGGTTTGAGCATTGGAGATTTGTTTCCTTCTGCCAAATGGCTTCAACTTGTTACTGGTTTGAAGCCTAAGCTTGAGAAGCTGCATCGACAAATTGATCGGATTCTGGGAGATATCATCAATGAACACCAACAGACAAATCCAAAAGCCACAGAAGGGCAGGGTGAAGCAGACCAAGATTTGGTAGATGTTCTCCTAAAATTCCAGGATGGTAATCAGAGAAACCATGATATCTGCTTAACTATTAACAATATCAAGGCTATAATCCTGGATATCTTTTCTGCTGGAGGAGATACAGCAGCTTCTACCATAAATTGGGCAATAGCAGAGATGATAAGGGATCCGAGAGTAATGAAGAAAGCACAAGATGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGATTGATGAAATATGCATGGATGAAGTCAAGTACTTGAAATCAGTGGTCAAAGAGACCTTAAGGTTACACCCACCAGCTCCTCTTTTACTTCCAAGAGAATGTAGAGAAGCATGTGAGATTAATGGGTATGATATTCCAGCTAAAAGCAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCTAAGTATTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCAATGATAGCTCTATTGATTACAAAGGGAGTAGTTTTGAGTACCTTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGTATCACATTTGGTTTGATAAATATTGAAGTGGCTCTTGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGAAATGAAATTTGGGGACTTGGACATGACTGAGGAATTTGGAGTGACTGTTAGAAGAAAAAATGACCTATGCTTGATACCAGTCACTTATAGCCATGCAAGAAAGTTATGA 1518 0.3893 MDYELPKILSFTMPFILFIILALKKTESSQKIPPGPWKLPVIGNIHNLLSSAPHTKLRDLAKIYGPLMHLQLGEIFTIIVSSPEYAKEIMKTHDLIFSSRPKILASDILCYQSTDIVFSPYGNYWRQLRKICTVELFTQKRVNSFRPIRESEFTNLVKMIDSHQGSSINLTEAVLSSIYNIISRAAFGMKCKDQEEFISVVKEGALAVSGLSIGDLFPSAKWLQLVTGLKPKLEKLHRQIDRILGDIINEHQQTNPKATEGQGEADQDLVDVLLKFQDGNQRNHDICLTINNIKAIILDIFSAGGDTAASTINWAIAEMIRDPRVMKKAQDEVREVFNMKGRIDEICMDEVKYLKSVVKETLRLHPPAPLLLPRECREACEINGYDIPAKSKVIVNAWAIGRDPKYWSEAERFYPERFNDSSIDYKGSSFEYLPFGAGRRICPGITFGLINIEVALAYLLYHFDWKLPNEMKFGDLDMTEEFGVTVRRKNDLCLIPVTYSHARKL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1321 505 Gene3D Cytochrome P450 19 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vra11g1321 505 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1321 505 PANTHER CYTOCHROME P450 71B11-RELATED 21 501 - -
Vra11g1321 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 21 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1321 Vra-Chr11 16207389 16209598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1321 5 499 Cytochrome P450 AT3G26300 41.782 1.33e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1321 - - gmx:102665189 825.469