Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1320 ATGGATCTTAAGATCTTTGATATGTTAGCTCCTATTGCCCTTTTCTTCCTGATGCTGGTGGCACTGAAATTTTGGAGGAATCTCACCAAAACTAAGCCAACTCCAAAGACACCTCCAGGGCCATGGAAGCTACCTATCATAGGAAACATACCTCATCTTGTTACACCAACACCACACAGAAAACTAAGAGACTTGGCCAAAAAATATGGGCCCTTGATGCATCTCCAACTTGGAGAGGTCTTCACTGTAGTTGTTTCCTCAGCAGAATGTGCCAAAGAGATAATGAAAACTCATGATCTTCTCTTTGCATCAAGGCCTCTGATTCTAGCTTCAAAGATAATCGGTTATGATGCCACAAACATATCTTTTTCCCCTTATGGAAATTATTGGAGACAGTTGAGGAAAATTTGCACAGCTGAGCTTTTCACTCCAAAACGTCTCAATTCTTTCAAGCCTATAAGAGAAGAAGAGCTCTCAAGTCTCATCAAAATCATTGCTTCAGAAAATGGATCACCATTCAATCTCTCTGAGGCACTTCTCACATCCAACTATGCAATAATTTCGAGGGCAGCTTTTGGCAAGACGTGCAAAGAGCAAGAACAATATATATCAGTGCAAAAGGAAGTGCTTAAGGCTGCAGGAGGATTTGACATTGGAGATTTGTTTCCTTCTGCCACATGGCTCCAAAATTTTACTGGTTTGAGGCCTACCCTTGAGAGATTGCACCGAAAAAGTGATCAAATACTTGAAAACATCATGAGGGAGCACAAAGATAAAAGGTCAAAATCCAAAGAAGGTCTGGTTGAAGCAGAAGAGGACCTTGTAGATGTCCTTCTAAAATTTCAGGATGATAGTGGTGAAAATCAGGATATTTGCTTGACTGATGACAACATTAAGGCTATAATTGATAATATCTTTGCTGCTGGAGGTGAGACATCAGCAACTACCATAGATTGGACAATGGCAGAGATGATAAGGAATCCAAGGGTGATGAAGAGAGCACAGGCTGAAGTGAGAGAGGTATTCAAGATGAATGGAAGGGTTGATGAAACTTGCATCAATGAAATGAAATATTTGCTGTTAGTTATCAAAGAGACATTGAGGTTACACCCACCAGCACCTCTTTTACTTCCAAGAGAATGTGGACAAACATGTGAGATTAATGGGTATGATATACCAGTCAAAAGCAAGGTAATTGTCAATGCCTGGGCTATTGGAAGAGATCCAAACAGTTGGAGTGACCCAGAGAGGTTTTATCCTGAGAGATTCACTGATAGCTGTGTTGATTACAAAGGGAATAATTTTGAGTTGATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGTATCACATTTGGTTTGATGAATGTTGAACTCACACTCGCACTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGCTGAGGAATTGGACATGACTGAGCAATTTGCACTAACTGTTAGAAGAAAAGATGGCCTGTTTTTGATTCCCTCCATTGCAACACAATGGTCATAA 1527 0.4034 MDLKIFDMLAPIALFFLMLVALKFWRNLTKTKPTPKTPPGPWKLPIIGNIPHLVTPTPHRKLRDLAKKYGPLMHLQLGEVFTVVVSSAECAKEIMKTHDLLFASRPLILASKIIGYDATNISFSPYGNYWRQLRKICTAELFTPKRLNSFKPIREEELSSLIKIIASENGSPFNLSEALLTSNYAIISRAAFGKTCKEQEQYISVQKEVLKAAGGFDIGDLFPSATWLQNFTGLRPTLERLHRKSDQILENIMREHKDKRSKSKEGLVEAEEDLVDVLLKFQDDSGENQDICLTDDNIKAIIDNIFAAGGETSATTIDWTMAEMIRNPRVMKRAQAEVREVFKMNGRVDETCINEMKYLLLVIKETLRLHPPAPLLLPRECGQTCEINGYDIPVKSKVIVNAWAIGRDPNSWSDPERFYPERFTDSCVDYKGNNFELIPFGAGRRICPGITFGLMNVELTLALLLYHFDWKLPNGMKAEELDMTEQFALTVRRKDGLFLIPSIATQWS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1320 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PANTHER CYTOCHROME P450 71B11-RELATED 9 504 - -
Vra11g1320 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 504 - -
Vra11g1320 508 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 Coils Coil 253 273 - -
Vra11g1320 508 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g1320 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1320 Vra-Chr11 16201213 16203378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1320 12 502 Cytochrome P450 AT3G26300 43.400 2.49e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1320 - - gmx:100801936 724.931