Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1297 ATGGCTAAAAACGATTTGAAGCTTTTGGGTGGGTGGTTCAGCCCTTTTGCCCTAAGGGTGCAGATTGCCCTTAACCTGAAGGGTGTAGATTACGAGGTTATTGAAGAGACCTTGAATCCCAAAAGTGAACTTCTTCTTAAGTCCAATCCTGTGCACAAGAAAATCCCAGTTCTCCTTCATCAAGATAAAGTCATATGTGAATCTGCAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCCTCCATCCTTCCACAAAATGCCTATGATCGAGCTAATGCCAGATTTTGGGTTGCTTACATCGATGACAAGTGGTTTTCGGCCTTGAAAAGTATTCTAAATGCTGAAGAGAATGATGAAGCAAAGGAGGCACAGTTTGAGCAAGCAGAAGAAGTGTTTGAGAGGATGGAAGAAGTGATGAACAAGGGCAGTGAAGGAAAGGCCTTTTTCGGAGGAGACACCATTGGATTCATTGATATTGGTTTTGGAAGCTTTCTGAGTTGGATCAGAGTGGTGGAAAAGATGAATGCAAGAAAATTGATTGATGAAATCAAGCACCCTGGCTTGTTCCAATGGACTGAAAATTTTGCTGCTCATCCTGCTGTCAATGGCCTTATACCAGACACTGACAAACTTATTGAAGTTGCCAAGGCTTTTAAGCAAATATTAAGGGCTCGTGCAGCTGCAAACTAA 699 0.4235 MAKNDLKLLGGWFSPFALRVQIALNLKGVDYEVIEETLNPKSELLLKSNPVHKKIPVLLHQDKVICESAIIVEYIDEVWTHAPSILPQNAYDRANARFWVAYIDDKWFSALKSILNAEENDEAKEAQFEQAEEVFERMEEVMNKGSEGKAFFGGDTIGFIDIGFGSFLSWIRVVEKMNARKLIDEIKHPGLFQWTENFAAHPAVNGLIPDTDKLIEVAKAFKQILRARAAAN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1297 232 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Vra11g1297 232 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 219 - -
Vra11g1297 232 Coils Coil 114 134 - -
Vra11g1297 232 Gene3D Glutaredoxin 1 85 - -
Vra11g1297 232 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vra11g1297 232 SFLD Glutathione Transferase (cytosolic) 2 229 IPR040079 -
Vra11g1297 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 221 IPR010987 -
Vra11g1297 232 CDD GST_N_Tau 6 79 - -
Vra11g1297 232 Pfam Glutathione S-transferase, C-terminal domain 101 202 IPR004046 -
Vra11g1297 232 SFLD Main.3: Omega- and Tau-like 2 229 IPR045073 -
Vra11g1297 232 CDD GST_C_Tau 90 221 IPR045074 GO:0004364|GO:0006749
Vra11g1297 232 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vra11g1297 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Vra11g1297 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vra11g1297 232 Gene3D - 86 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1297 Vra-Chr11 15909922 15911131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1297 1 219 Glutathione S-transferase Gene Family AT1G10370 55.909 1.77e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1297 K00799 - gmx:547576 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0612 7 11374987 11376082 Vra11g1297 11 15909922 15911131 PCT