Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1244 ATGTCGACAGTGAAACTCTCTCCTCCGATACACTCCCAATTTTCTTCCCACCACAATCCTTCGACAACCTCGGACCGCGGCATTGTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAATCCGGAGAAGGCCTTCCGCTTGAACCCCAAACTCCGCTCCTCCCCTCTCGCCGCCCTGGAATCCGTCACGCGCTGTCTCTACTCCCTCGGAGTCCCACGCGCCTCCTTGGGGCGCATCCTCGACATGCATCCCGTGCTCCTCACCTGCAACCCCTACTACCAACTGTATCCCCTCCTCGACTTCCTCCTCCACGAGGTTGCAATCCCCTTCCCCGACGTCCACCTCTGCATTATCCGCTGCCCCAGATTGCTCGTTTCCAGCATTGATAATCAATTGCGTCCCACACTGTTCTTTCTAAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTGGGGTTCACTCACATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTGTTGACTTTGAGCGTGATGAAGAATTTGGCACCCAAAGTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTTCTGAGCTCAAGAGGTTTCCTCAGTACTTCTCTTTTAGCTTGGAACGGAGGATTAGGCCGAGATTTGGGATGCTGAGGCAGCTTGGCGTGTCGGTGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTGAGGTTTAAGACTCTTGAGTTTGGAGTAGGATAA 849 0.523 MSTVKLSPPIHSQFSSHHNPSTTSDRGIVFHEKVRYLKALKVNPEKAFRLNPKLRSSPLAALESVTRCLYSLGVPRASLGRILDMHPVLLTCNPYYQLYPLLDFLLHEVAIPFPDVHLCIIRCPRLLVSSIDNQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLEDTLLPKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVMKNLAPKVEFFLKEMNGDVSELKRFPQYFSFSLERRIRPRFGMLRQLGVSVPLEDMLKVSDGEFNARLLELRFKTLEFGVG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1244 282 MobiDBLite consensus disorder prediction 1 25 - -
Vra11g1244 282 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 15 278 - -
Vra11g1244 282 Pfam mTERF 54 265 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 PANTHER CGI-12 PROTEIN-RELATED 15 278 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 Gene3D Transcription termination factor 3, mitochondrial 34 278 IPR038538 -
Vra11g1244 282 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 SMART mt_12 187 219 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 SMART mt_12 45 75 IPR003690 GO:0003690|GO:0006355
Vra11g1244 282 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1244 Vra-Chr11 14430969 14432139 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra11g1244 mTERF 2.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1244 K15032 - gmx:100785219 430.254