Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1216 AGTGCTTCCAGGCTTCACCATCAGAAGGATGCTGTCAGTGCTGCAGTCTCTTTTCCATCCACCTCTCTCCAAAGTAAGACCTCCATCGTTGCCCCGGAGAGAGTCATTTTCAACAAGGTATGTCTAAGAGATGTTTCCAGCAATGGAAGGGTGGTTTCCATCAGAGCTCAGGTCACCACTGAGGCACCAACCAAGGTTGAAAAAGAGTCTAAGAAACAGGAGGAAGGTGTGATTGTGAACAAGTTCAAACCCAAGGCCCCATACATTGGTAGAGTCCTTCTCAACACAAAGATCACAGGGGATGATGCTCCAGGAGAAACTTGGCACATGGTCTTCAGCACCGAGGGAGAGGTTCCTTACAGAGAAGGACAACTAAAAGCTATGTTGGTTGACATCAAAGCATCAAACATCTTAGTCAATGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCACGGTTATCTGATGATTCTACAGCAAATCATATTTCAACTCAAGTAAAAGGAACAACTGGTTACATGGATCCTGAGTATCTAAGAACATATCAACTCAATAAAAAAAGTTATGTTTATTTCTTTGGTGTTTTTCTTGTAGAAATGGTGACAGGAAGGCATCCAATTGAACCAAAGAGACCCCTTGATGAAAAAGTGACAATCTGA 663 0.4284 SASRLHHQKDAVSAAVSFPSTSLQSKTSIVAPERVIFNKVCLRDVSSNGRVVSIRAQVTTEAPTKVEKESKKQEEGVIVNKFKPKAPYIGRVLLNTKITGDDAPGETWHMVFSTEGEVPYREGQLKAMLVDIKASNILVNENLKAKVADFGFARLSDDSTANHISTQVKGTTGYMDPEYLRTYQLNKKSYVYFFGVFLVEMVTGRHPIEPKRPLDEKVTI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1216 220 PANTHER - 11 128 IPR015701 GO:0016491
Vra11g1216 220 SUPERFAMILY Riboflavin synthase domain-like 68 183 IPR017938 -
Vra11g1216 220 Gene3D Transferase(Phosphotransferase) domain 1 122 219 - -
Vra11g1216 220 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 11 128 - -
Vra11g1216 220 SUPERFAMILY Protein kinase-like (PK-like) 131 214 IPR011009 -
Vra11g1216 220 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g1216 220 Pfam Protein kinase domain 129 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1216 Vra-Chr11 13287533 13288560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1216 131 209 Receptor kinase-like Gene Family AT5G49760 62.025 5.96e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Vra11g1216 Pkinase 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1216 K02641 - vra:106776791 435.647