Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1215 ATGGACATTTCAGAGCTGGCCAAGAAACTCGATCTCTCCGATTCCAAACTCGTCGTCCGAAAAGCCGCCGAGATCCGTCGCCTCTGCGATGTCCAGTTCGATTCCTCCGTCATCGGAGTCGGCGAGGTTGCTAAATCTCTTATTTGCTTGGAAATCGCGGCCACAAGGCTCGGCGTTCTCTTCGACCGATCCTCTGCGGTGAGGCTAAGCGGAATGTCCGAAAAAGCTTACATCAGATCCTACAATTCTCTCCACAACGGCCTTGGCGTCAAGATGAAGATAGATGTGAGGGAATTGGCGATTCAGTTTGGTTGCGTTCGTATTATTCCTTTCGTTCGCGACGGTCTCAAACTGTATAAGGATCGTTTTCTTTCGTCTTTGCCGGCTTCTCGTCGTGCAAGTGCTGATTTCACGCGTCCGGTGTTCACCGCTGTTGCTTTTTATCTATGTGCTAAAAAACACAAGCTCAAAGTGGACAAGCTGAAGTTAATTGAGCTTTGTGGTACATCTGAATCCGAGTTTTCTAGTGTTTCTGTTACTATGAAGGATTTGTGTCATGACGTGTTTGGGGTTGCAAAGGAAAAAAAGGATGCTAGGGAAGTGCAATCAAATAGAGATTTGCTTGACGTGTTGCCAAGTAAAAGGAAAGCCGAGGATGGAGGTTATTTTTCCGATGATGGTCCTGAGCTTTCATGTTATAAAAAACGCAAGCAAATGGAAACATGTGATTATGAAAAGTGGAAATCTTCAGTGGTTGCATCCAATCAACAAAACAAGACAGAAGCTCCTTGCAAACGTACCAAACAAACTCGTCTCAACTTTATCAAGAAATCTTCCGATACTCAGGAATTAGAGGCCATGTGA 864 0.4514 MDISELAKKLDLSDSKLVVRKAAEIRRLCDVQFDSSVIGVGEVAKSLICLEIAATRLGVLFDRSSAVRLSGMSEKAYIRSYNSLHNGLGVKMKIDVRELAIQFGCVRIIPFVRDGLKLYKDRFLSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSVTMKDLCHDVFGVAKEKKDAREVQSNRDLLDVLPSKRKAEDGGYFSDDGPELSCYKKRKQMETCDYEKWKSSVVASNQQNKTEAPCKRTKQTRLNFIKKSSDTQELEAM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1215 287 PANTHER BNAC05G50940D PROTEIN 1 284 - -
Vra11g1215 287 CDD Orc6_mid 93 188 - -
Vra11g1215 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Vra11g1215 287 Gene3D - 92 188 - -
Vra11g1215 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 284 IPR020529 GO:0005664|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1215 1 285 Core DNA Replication Machinery Family AT1G26840 67.018 8.48e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1215 K02608 - gmx:100777539 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1215 11 13263794 13266917 Vra11g1215 11 13263794 13266917 ECH