Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1186 ATGTTCAGATCAGCTCAATCCGCTTCAAAACCTTCCAAATCCACCATCAAATTCCTCTGCAGTTACGGCGGCAGAATCCTCCCCCGTTACCCTGACGGCAAGCTCCGCTACCTCGGAGGCCACACCCGCGTCCTCGCCGTCGACCGCTCTATTACCTTTTCCGAGCTGCTGCTGAAGATGGAAGAGCTCTGCGGTGCCTCCGTGAGGCACATCCGCTGCCAATTACCCTCTGAAGACCTCGACGCTCTTATCTCCATCACCTCCGACGAAGATCTCGTCAATCTCATCGAGGAATACGACCGCGTTTCATCGCTCAAGATCAGAGCCTTCCTCTCGCCGCCCACGCCGTCGAGATCTCCGAACAACGCTTCCATTCCTCCGTCGAAGTCAGCTTCATTATCTTCCTCCTCAGCCTCATCGTCGTCGTCCTCTTCGTCGTATTGCAGCCCTACCGGCAAATCTGGGCCGAGTTACAGAACCTCGGCGACGGTGGTCGACCGTTGCGTCCATCAGATGTCGCCGGCTCCGGCGTACCGGACCGCAGTGGACAAATCGAAAGCATCCGGGAGGAATATTCCTCTCCCGCGCTACGGTTACCACGGGAGCGGTGGCCAGGTTTACCTGATCCACCACGGAAACCACTGGCAATAA 651 0.573 MFRSAQSASKPSKSTIKFLCSYGGRILPRYPDGKLRYLGGHTRVLAVDRSITFSELLLKMEELCGASVRHIRCQLPSEDLDALISITSDEDLVNLIEEYDRVSSLKIRAFLSPPTPSRSPNNASIPPSKSASLSSSSASSSSSSSSYCSPTGKSGPSYRTSATVVDRCVHQMSPAPAYRTAVDKSKASGRNIPLPRYGYHGSGGQVYLIHHGNHWQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1186 216 MobiDBLite consensus disorder prediction 113 159 - -
Vra11g1186 216 PANTHER OS05G0427100 PROTEIN-RELATED 7 215 - -
Vra11g1186 216 SMART PB1_new 30 114 IPR000270 GO:0005515
Vra11g1186 216 SUPERFAMILY CAD & PB1 domains 32 120 - -
Vra11g1186 216 Gene3D - 34 112 - -
Vra11g1186 216 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 7 215 - -
Vra11g1186 216 MobiDBLite consensus disorder prediction 114 159 - -
Vra11g1186 216 CDD PB1_UP2 19 111 - -
Vra11g1186 216 Pfam PB1 domain 32 113 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1186 Vra-Chr11 12382631 12384296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1186 16 111 MAP Kinase Kinase Kinase AT5G57610 51.485 1.02e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1186 - - gmx:100810685 313.153