Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1175 ATGAAAATGGCACGAATCTTCCTTACCACTCTTTCTCTGCTGCTCCTGCTCCTTGCTCCTTCCGAGGCTGATCAAATAAATCCCTACCAACCAACATCTTTTTCTGAAATTCATAAACCATTTCTGGGCCGCCGTGATGATTCCCACAGTAAACTAACAGGTGACACACCCGAGGAAAGAAAACAATTCGATGATCGAGAACGCTACACATTGCCTCAAAATGCTTTCCACACTCCTGACAAACTCACTGAAGGATTCTACGACCAAGTTTGCCCCGGTTTACAAAACATCATCACCCAAGCTTTCCGCCAGATCGTTGAGCAGAATTCAGGCGCAATCGGTAACATCATTCGCCTTCAGTTCCATGACTGCTTCGTCAATGGATGCGATGCATCGATATTGTTAGATTATACACCATCGGGTGACATGGTTGAGAAAGGTTCGGCGTTCAATGGTTTTCTCCTGAAAGGGGCTGACATGATAGATGACATAAAGGCAAAGGTGGAGAGCAAGTGTCCTGGAATCGTGTCATGTGCAGACATATTGGCATTTACAACCCACGTAGCAATGACAATGGCGGGTTTACCTGCTCAGAGGCCCCTTGGAGGTCGCAAAGACGCTACCGTTTCCTTTGCAAGCGTTGTAGAAGCCGACAATCTTCCTATGTCAGATTGGAACATCGACCAAATGATGGAACTGTTTGGCAGGAAAGGGTTCAACATAGAAGAAATGGTGGTGATGATTGGTGCACATTCTGTTGGGATTACTCATTGCGACTTCTTCATGCAGAGGGCCTTAGACTTCAATAAGACTGGGGTCCCTGACCCTACCCTGGGTCAGGAGACGATTGATGAAATCAAAAAAGCATGTCCTAATCCTGGCACAACCCTGTTTAGGAATCCCCCTGTGAACTTTGATGCCACACCAACTGTTCTTGATAACCTCTTCTTCAAGGACATGGTGGATAAAAGGAGAACTTTGCTCATTACAGATGGACATCTTATTGAAGATAGCAGAACTAGGCCAATCGTCGAACAGATGGCAGCCGACCCTAACTTGTTCCCCAAGAGGTTTCCTGAGGTCATGCTCAAGCTCATGTCTTTGAATGTGCTCACAGGAAATGAAGGGGAGGTGAGGAAGATTTGTAGATCCACTAATTAA 1161 0.4599 MKMARIFLTTLSLLLLLLAPSEADQINPYQPTSFSEIHKPFLGRRDDSHSKLTGDTPEERKQFDDRERYTLPQNAFHTPDKLTEGFYDQVCPGLQNIITQAFRQIVEQNSGAIGNIIRLQFHDCFVNGCDASILLDYTPSGDMVEKGSAFNGFLLKGADMIDDIKAKVESKCPGIVSCADILAFTTHVAMTMAGLPAQRPLGGRKDATVSFASVVEADNLPMSDWNIDQMMELFGRKGFNIEEMVVMIGAHSVGITHCDFFMQRALDFNKTGVPDPTLGQETIDEIKKACPNPGTTLFRNPPVNFDATPTVLDNLFFKDMVDKRRTLLITDGHLIEDSRTRPIVEQMAADPNLFPKRFPEVMLKLMSLNVLTGNEGEVRKICRSTN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1175 386 PANTHER PEROXIDASE 53 384 - -
Vra11g1175 386 Pfam Peroxidase 100 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 ProSiteProfiles Plant heme peroxidase family profile. 81 386 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Haem peroxidase superfamily signature 176 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Haem peroxidase superfamily signature 194 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Haem peroxidase superfamily signature 305 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 ProSitePatterns Peroxidases proximal heme-ligand signature. 243 253 IPR019793 -
Vra11g1175 386 Gene3D - 86 386 - -
Vra11g1175 386 SUPERFAMILY Heme-dependent peroxidases 82 386 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 91 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 115 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 156 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 175 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 194 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 242 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 303 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PRINTS Plant peroxidase signature 360 373 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 PANTHER PEROXIDASE 25-RELATED 53 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g1175 386 CDD secretory_peroxidase 81 385 IPR033905 GO:0004601|GO:0042744
Vra11g1175 386 Gene3D Peroxidase, domain 2 221 365 - -
Vra11g1175 386 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1175 Vra-Chr11 12171105 12172841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1175 81 386 Peroxidase AT4G08770 36.656 1.76e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1175 K00430 - gmx:100802856 474.167