Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1136 ATGGCGGAGCAGACTAACCGCTGGAGCTGGAACATCACCGGCTTCGAGCCGTGGAATTCGACGTCGACGTCTTCTTCGCCGGAGCAAAACGATCAGAAACCATCTACACCGTTTGCGAGAAGAAACTCCACCTCCTCGGTTCCTTCGCACTCCGTGGCTTCCAAAGTTGAGGAATTAAGAGACAAGGTTAAGCTTGCAAGAAATGACTACCTGCAGTTAAGACAAGAAGCTAGTGAACTTCAAGAATATTCAAATGCAAAACTTGACCGAGTGACACGATATCTTGGTGTTCTTGCGGAGAAAGCCCACAAGTTAGATCAATCTTCGCTTGAAACTGAGGCAAGAATATCTTCTGTGATCTATGAAAAGAAGAAATTGTTCAATGACTTATTGACATCTAAAGGTAACATAAGGGTATTCTGCCGAGCTAGGCCATTATTTGAAGATGAAGGTTCCTCAGTTGTTGAATTTCCAGATGATTATACTATACGAGTAAATACTGGCGATGAATCCTTGTCTAACTCAAAGAAAGAATTTGAATTTGACAGAGTTTACGGACCTCATGTTGGACAGGCTGAGTTGTTCAGTGATGTTCAACCAATGGTGCAATCAGCTTTGGATGGATATAATATTTCCTTATTTGCATATGGACAAACACATTCTGGAAAAACACACACTATGGAAGGATCAAGCTATGATAGGGGATTATATGCTCGTTGCTTTGAGGAGTTGTTTGACTTGTCCAACTTGGACACAACTGCTACTTCTCAATATACATTCTCTGTTACTGTTTGTGAGCTCTATAACGAACAGATAAGGGATCTGATCTCGGAGTCAGGGAAAAACTTGCCTAAACTGTGTTTTGCTTCACCTGAATATCTCATAGAACTAATGCAGGAAAAAGTTGATAACCCTATGGAATTTTCTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATAATCCATTAAAGATTAATGTTTCTCATTTGATTGTTACCATACACATATTTTATAACAATTTGATCAGCGGTGAAAACTCATATAGCAAGTTGTCTCTGGTTGATTTGGCTGGAAGTGAAGGTTTGATATCAGAAGATGATAGTGGTGAGCGTGTCACAGATATGCTTCATGTTATGAAGTCATTTTCAGCGCTGGGAGATGTATTATCTTCTTTGACTTCAAAAAAGGATGTTATTCCTTATGAAAACTCAGTGTTGACGAAACTGTTTGCGGATTCTCTTGGTGGAAGTTCAAAATCTCTGATGATTGTAAATGTGTGTCCAAATTCTTCGAATTTATCTGAGACATTACTGTCTCTCAATTTCTCTGCCAGAGCTCGTAATTCTGTCTTAAGCCTTGGAAATCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGTAAAGAGTTATATGAGAAGGAAAAAGAAATCCAAGATCTCAAACAAGATGGTCTGAGACTTAAGCAAGCACTGAGAGATGCAAATGATCAGTGTGTTCTACTCTTCAACGAAGTACAAAAGGCATGGAAAGTTTCTTCTGCATTGCAGACAGATTTACAGGCAGAGCATATTTTGCTGGCTGATACTTATAAGGCAGAGAAAGAAGAAAATTCTCAGCTTAGAAATCAAGTTGCTCATATGTTACAGTTAGAAAAAGCACAAAATTTGCAGATACAACAGCGCGATTCAACCATTAAAAGTTTGGAGGCCAAAATTGGAAGCCTTGAAATACAACTCAATGAAGCCCTTAGTTCCAGCAACACTAGGTTAAATGTTGTACCAGAAACTGTTTCCGGAGCTCTACCTAATTCCAGGACAACAGGGGATGTCATGGATTCATCTACAGTAACCAATAAATTGGAAGAGGAACTCAAGAAACGTGATGCTTTGATTGAGAGGTTGCATGTAGAAAATGAGAAATTATTTGATAAGTTGACTGAGAAAGCATCTCTGGCTGGATCACCTAAGCTGTCAAGTCCATTATCTAGGGGATCAATTAATGTTGAGCCTGGAAATGTGGGCAGCACAACTGCTAGAGCTCGTTCTATGGATGTCCTTCCTCCAACTTTTGTCACAGATAAGAATGATGGCACTGTTGCTTTAGTTAAATCTGGTTCTGAGAGAGTTAAGACTACCCCTGCCGGTGAATATCTTACTGCAGCACTGAATGACTTTAATCCTGATCAGTATGAAGGACTTGCTGCCATTTCTGATGGTGCAAACAAGCTTCTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCGTCCAGAGAACACGAAATACTTGCTGAAATTAGAGATGCTGTTTTTTCATTTATTCGAAAAATGGAGCCAAGGCGAGTAATGGATACCATGCTTGTTTCCCGTGTTAGAATCTTGTATATAAGATCTTTGCTTGCCAGATCCCCAGAGTTGCAATCCATTAAGGTATTGCCAGTTGAGTGCTTTCTTGAAAAGGCCAACACTGGACCCAGTAGAAGTTCCAGCCGAGCAAGCAGTCCTGGAAGATCTTCAGTGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATATAAAGCCGGAAAAGAAATCGAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGAAACCTGGAGACAGCAGGTAACTGGGGGAAAGCTTAGGGAAATCAGTGAGGAAGCAAAAAGTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCTGGAGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAAGTTTGATTTTCTATCTATTATGGGAAATGATGTACCGGGGGGAACAAATGGTCAGTTGGAGCTTATTTCAACTGCCATTTTGGATGGTTGGATGGCTGGACTTGGCAGTGCTCTGTCCTCCCAAACTGATGCCCTTGGTCAACTTCTATTTGAATATTCAAGACGTGTCTATACTTCTCAACTGCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCGGCACAAGTGGCCAAGTTGCGTTCAGCACTAGAATCTGTTGATCACAAAAGAAGAAAGATTTTACAACAAATGAGAAGTGATGTAGCTTTACTGACCTTGGAAAATGGTGGTTCACCTGTTCAAAATTTTTCTACTGCTGCTGAGGATGCAAGATTAGCGTCTCTTATTTCACTTGATAGAATATTGAAGCAAGTCAAGGATATAACTAAACTTTCTACTGTGAACACCATCGAGAAAAGTAAGAAAAGAACAGTGCTTGGTTCTCTAGACAAACTGACAGAACAAATGTCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGTACATTGCAGATGCTCGCAGAGTGGTTGAGTCAATTCCTGAAGAAGATGACCGCATTCAGAACCTATCACATTCTCGTATGCCATCTACTGATACAGGCTCTGGGTCTGGAACTGATGTGGCACAGTGGAATGTCCTTCAATTCAATACGGGTAATACCTCCTCATTTATAATAAAATGTGGAGCAAACTCAAATTCAGAACTAATCATTAAAGCCGAGGCTAGAGTTCAGGAACCTAAAGGAGGTGAGATTGTGAGGGTTGCCCCAAGGCCATCCATTTTGGAAAATTTGAGCTTGGAAGAAATGAAACAAGTATTTGCTGAACTACCCGAGGCTCTAAGATTGCTTGCCCTAGCAAGGACTGCAGATGGAACTCGAGCACGATATTCAAGATTATATAGGACTTTGGCTATGAAGGTTCCATCACTTAGGGATCTGGTAAGTGAGCTTGAAAAAGGGGGTGCACTGAAAGATGTGAGGACATGA 3840 0.4099 MAEQTNRWSWNITGFEPWNSTSTSSSPEQNDQKPSTPFARRNSTSSVPSHSVASKVEELRDKVKLARNDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKAHKLDQSSLETEARISSVIYEKKKLFNDLLTSKGNIRVFCRARPLFEDEGSSVVEFPDDYTIRVNTGDESLSNSKKEFEFDRVYGPHVGQAELFSDVQPMVQSALDGYNISLFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNLDTTATSQYTFSVTVCELYNEQIRDLISESGKNLPKLCFASPEYLIELMQEKVDNPMEFSRVLKAAFQSRGNNPLKINVSHLIVTIHIFYNNLISGENSYSKLSLVDLAGSEGLISEDDSGERVTDMLHVMKSFSALGDVLSSLTSKKDVIPYENSVLTKLFADSLGGSSKSLMIVNVCPNSSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIQDLKQDGLRLKQALRDANDQCVLLFNEVQKAWKVSSALQTDLQAEHILLADTYKAEKEENSQLRNQVAHMLQLEKAQNLQIQQRDSTIKSLEAKIGSLEIQLNEALSSSNTRLNVVPETVSGALPNSRTTGDVMDSSTVTNKLEEELKKRDALIERLHVENEKLFDKLTEKASLAGSPKLSSPLSRGSINVEPGNVGSTTARARSMDVLPPTFVTDKNDGTVALVKSGSERVKTTPAGEYLTAALNDFNPDQYEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPRRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGPSRSSSRASSPGRSSVQYVDEQIQGFKVNIKPEKKSKFSSVVLKIRGIDEETWRQQVTGGKLREISEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAEKFDFLSIMGNDVPGGTNGQLELISTAILDGWMAGLGSALSSQTDALGQLLFEYSRRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPVQNFSTAAEDARLASLISLDRILKQVKDITKLSTVNTIEKSKKRTVLGSLDKLTEQMSSLLEIDHPCAQRYIADARRVVESIPEEDDRIQNLSHSRMPSTDTGSGSGTDVAQWNVLQFNTGNTSSFIIKCGANSNSELIIKAEARVQEPKGGEIVRVAPRPSILENLSLEEMKQVFAELPEALRLLALARTADGTRARYSRLYRTLAMKVPSLRDLVSELEKGGALKDVRT* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1136 1279 Coils Coil 624 644 - -
Vra11g1136 1279 MobiDBLite consensus disorder prediction 825 844 - -
Vra11g1136 1279 MobiDBLite consensus disorder prediction 657 679 - -
Vra11g1136 1279 SMART kinesin_4 134 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 MobiDBLite consensus disorder prediction 1 52 - -
Vra11g1136 1279 Coils Coil 56 83 - -
Vra11g1136 1279 Pfam Kinesin motor domain 142 449 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 Gene3D Kinesin motor domain 80 450 IPR036961 -
Vra11g1136 1279 Coils Coil 460 501 - -
Vra11g1136 1279 Coils Coil 569 589 - -
Vra11g1136 1279 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1255 - -
Vra11g1136 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 486 IPR027417 -
Vra11g1136 1279 MobiDBLite consensus disorder prediction 826 844 - -
Vra11g1136 1279 MobiDBLite consensus disorder prediction 1131 1154 - -
Vra11g1136 1279 ProSiteProfiles Kinesin motor domain profile. 136 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1255 IPR030109 GO:0008017|GO:0009904
Vra11g1136 1279 Coils Coil 534 554 - -
Vra11g1136 1279 PRINTS Kinesin heavy chain signature 208 229 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 PRINTS Kinesin heavy chain signature 351 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 PRINTS Kinesin heavy chain signature 400 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra11g1136 1279 ProSitePatterns Kinesin motor domain signature. 350 361 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra11g1136 1279 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1136 Vra-Chr11 11163025 11194549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1136 123 451 Calmodulin-binding Proteins AT5G65930 35.484 1.31e-48 187