Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1110 ATGTTAGCAGGCAGTGAAAACGGAGAAGTTTCTGCATATGGGTGGGCAGCCAGAGACGATTCAGGAATTCTCTCCCCATTCCACTTTACCAGAAGGGCAAACGGTGATAATGATATCACACTTGAAATACTCTACTGTGGGATTTGCCACACGGACCTCCACTTCGCGAGGAATGACTTTGGGATGTCGATCTATCCAATGGTTCCTGGGCATGAGATTGTGGGTAAAGTGACAAAGGTGGGAAGCAAAGTCACAAAATATAGTGTTGGAGACATAGCTGGTGTGGGTGGCTCGGTGGGTTCGTGTGGCTCATGTTCGGAGTGCAGCGAGGGCTTCTATGTGTATTGTCCAAAGATGATTTTAACCTACAGTGCACGCTTCCATGATGGAACAGTAACCCAAGGTGGATACTCTGATAATCTGGTGGTTGATCAGAACTTTGCGGTGCTAATCCCAAAGTCCATGCCACTGGCTAGTACAGCCCCCTTGTTGTGTGCTGGAATCACAGTTTACAGCCCGTTGAAGCATCACGGGCTTACTGAGCCCGGGTTGCACTTGGGTGTGGTGGGCCTGGGAGGCCTAGGTCACGTGGCTGTGAAGTTTGCTAAAGCTTTTGGCATGCGTGTCACTGTGATAAGTACATCTCCCAGCAAGAAAAAGGAAGCATTGGAGAGGTTTGGTGCAGATGCATTCTTGGTTAGTCGAGACCAACATCAGTTGCAGGATGCCATGGGAACCATGGACGCCATTATCGACACTGTTTCAGCTAATCACTCCATCCAACCACTGATTGGTTTATTGAAAACAAGAGGAAAGTTGATTTTGTTGGGTGGACCAGCGAAACCTATTGAGGTTTTAGCTATGCCTTTGCTTTTGGGGAGAAAGATGATTGCTGGAAGTGCAGGAGGTGGGAGAGAAGAGATTCAAGAGATGATTAATTTTGCAGCAAAACACAATATTACAGCAGATGTGGAAGTCATTTCAATGGAGTACGTGAACACTGCTTTGGATAGACTAGAAAAGAATGATGTTAAATATCGCTTTGTCATTGATGTGGCAAACACGATATAA 1071 0.4641 MLAGSENGEVSAYGWAARDDSGILSPFHFTRRANGDNDITLEILYCGICHTDLHFARNDFGMSIYPMVPGHEIVGKVTKVGSKVTKYSVGDIAGVGGSVGSCGSCSECSEGFYVYCPKMILTYSARFHDGTVTQGGYSDNLVVDQNFAVLIPKSMPLASTAPLLCAGITVYSPLKHHGLTEPGLHLGVVGLGGLGHVAVKFAKAFGMRVTVISTSPSKKKEALERFGADAFLVSRDQHQLQDAMGTMDAIIDTVSANHSIQPLIGLLKTRGKLILLGGPAKPIEVLAMPLLLGRKMIAGSAGGGREEIQEMINFAAKHNITADVEVISMEYVNTALDRLEKNDVKYRFVIDVANTI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1110 356 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 3 356 - -
Vra11g1110 356 SUPERFAMILY GroES-like 19 183 IPR011032 -
Vra11g1110 356 SMART PKS_ER_names_mod 22 350 IPR020843 GO:0016491
Vra11g1110 356 Pfam Alcohol dehydrogenase GroES-like domain 37 149 IPR013154 -
Vra11g1110 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Vra11g1110 356 CDD CAD1 14 351 - -
Vra11g1110 356 Gene3D - 166 322 - -
Vra11g1110 356 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Vra11g1110 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Vra11g1110 356 Gene3D - 15 352 - -
Vra11g1110 356 PANTHER ALDEHYDE REDUCTASE 3 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1110 Vra-Chr11 10700191 10701845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1110 11 356 Monolignol Biosynthesis Gene Families AT4G37990 63.295 1.29e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1110 - K23232 gmx:100801089 562.762