Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1086 ATGAAGCTTAGCACTAGTTTTATCCTGAAAAATATCATATATACCATGAACTTCTGTCACATTTTCACTAGAACAGTAGAAATTAATGGGAAAGAGACACCAAGGGGACGTGTTTTTGAAACAAACAATACTGTTCTCAATACTTTCGTAGGGATAAAGTGCATGCCCCAGATTTTATGTGATTTCCAGTATTGTTTAAATGGGCTGTTTTGTCAGATGGGAGATGTGGCAAAGGACCTAACTGCTGGGACTATTGGGGGGGTGGCGCAATTAATAGTTGGCCACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCCCTCCCAGGCCAGCTTCCCAGGTACTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGTGCCCCACTTGCCACAGTAGCAGCTTTCAATGCTGTTCTGTTTTCAGTTAGGGGGCAAATGGAAGCATTACTGAGGTCGCATCCTGGTGCTACTCTCACAGTAAATCAGCAGGTTGTTTGTGGAGCTGGAGCTGGAATTGCCGTTTCCTTTCTAGCTTGCCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTACATTAGCTGGCACTGGAGCAGCTACCGTGGCAGTGAAATATGGGGGACCCATGGATGTAGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCATAAGAGGTCTGTTCAAGGGCATGGTTCCCACTATGGCTCGTGAAGTACCTGGAAATGCTGCATTGTTTGGTGTATATGAAGCACTAAAGCAATTACTTGCTGGTGGCACTGATACCTCGGGACTGGATAGAGGTTCTCTGTTGCTTGCTGGAGGCTTGGCTGGAGCTGCATACTGGCTCGCAGTTTACCCAACTGATGTTGTCAAGAGTGTGATTCAAATAGATGATTACAAAAACCCGAAGTTCTCTGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTACTGAGGGGTTCAAAGGCCTATATAAGGGTTTTGGACCAGCAATGGCCCGAAGTGTTCCTGCCAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 1110 0.4649 MKLSTSFILKNIIYTMNFCHIFTRTVEINGKETPRGRVFETNNTVLNTFVGIKCMPQILCDFQYCLNGLFCQMGDVAKDLTAGTIGGVAQLIVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMEALLRSHPGATLTVNQQVVCGAGAGIAVSFLACPTELIKCRLQAQSTLAGTGAATVAVKYGGPMDVARQVLRSEGGIRGLFKGMVPTMAREVPGNAALFGVYEALKQLLAGGTDTSGLDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQIDDYKNPKFSGSIDAFRRISATEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1086 369 Pfam Mitochondrial carrier protein 174 272 IPR018108 -
Vra11g1086 369 Pfam Mitochondrial carrier protein 286 368 IPR018108 -
Vra11g1086 369 Pfam Mitochondrial carrier protein 76 167 IPR018108 -
Vra11g1086 369 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 73 369 - -
Vra11g1086 369 Gene3D Mitochondrial carrier domain 173 369 IPR023395 -
Vra11g1086 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 367 IPR018108 -
Vra11g1086 369 Gene3D Mitochondrial carrier domain 58 172 IPR023395 -
Vra11g1086 369 SUPERFAMILY Mitochondrial carrier 75 362 IPR023395 -
Vra11g1086 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 165 IPR018108 -
Vra11g1086 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 270 IPR018108 -
Vra11g1086 369 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 73 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1086 Vra-Chr11 10163997 10167650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1086 94 363 Antiporters AT1G79900 34.296 6.12e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1086 K15109 - gmx:100787332 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1086 11 10163997 10167650 Vra11g1086 11 10163997 10167650 ECH