Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1071 ATGGCAATTGAAAACCATGACACTGCTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGATGAGGACAATAGGTGGCCACCATGGTTGAAGCCACTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAACGGCCCTCTCTGCTCTCTCTGCCTCGCCCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCATACCATGATGTGATCAGGGTTTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGGCCTCAGCCAAGGCCAGGAAAAGGGGTCACAAACACATGTGAAGTCTGCGAGCGAAGCCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAACCCACAGAAGAAGAAGAAGCAGTCAACGGCAATGTCATCAGATTCTGAGGATTCATACAGTAGCAACAGCGTCCATGGCCTGCAGAAAAACTGCAAAGTTCAGAGCTTCACACCGTCCACTCCACCTCCAACTTCGGTTAATTACAGAACTGCCAAGAGAAGAAAGGGAATACCGCACCGAGCCCCAATGGGGGGACTAATCATAGAGTATTAG 711 0.4782 MAIENHDTAVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNPQKKKKQSTAMSSDSEDSYSSNSVHGLQKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1071 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Vra11g1071 236 MobiDBLite consensus disorder prediction 167 213 - -
Vra11g1071 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Vra11g1071 236 MobiDBLite consensus disorder prediction 164 230 - -
Vra11g1071 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1071 Vra-Chr11 9981473 9983843 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra11g1071 PLATZ 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1071 - - gmx:100797900 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1071 11 9981473 9983843 Vra11g1071 11 9981473 9983843 ECH