Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1034 ATGAATGGTTTTTCTCTCTTTCCCATTCCATTTTTTTTTGCAGTTGTCGTTGAGTTTGCGTCATTAGCTAAGGGATTTGAATGGGTCCAATGTCTCACGATTTTGGGTTTGGCCATAGAGAAGAAGAAATTCCAGGTCACAGATGGAAACTCTTCTAAGTGGATTTCAGCCATTGTTGTTTCCCAAGATCACAAGCCGGACCAAACTGATGAGAGGCGAAGGATTGAAGATGCAGGTGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTAGTGCATTTGGCGATAGACTCCTGAAGCGGTATGTTGTTGCTGATCCAGAAATACAGGGCTTTTCTTGCTCCTCAGATTCCCAATTCCAATTGTGTCTCGCTAGATCAAACAAGGAAATGCTCCGCTGA 420 0.4405 MNGFSLFPIPFFFAVVVEFASLAKGFEWVQCLTILGLAIEKKKFQVTDGNSSKWISAIVVSQDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSSAFGDRLLKRYVVADPEIQGFSCSSDSQFQLCLARSNKEMLR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1034 139 PANTHER PROTEIN PHOSPHATASE 2C 59-RELATED 56 126 - -
Vra11g1034 139 SUPERFAMILY PP2C-like 57 126 IPR036457 -
Vra11g1034 139 Gene3D - 45 132 IPR036457 -
Vra11g1034 139 ProSiteProfiles PPM-type phosphatase domain profile. 1 139 IPR001932 -
Vra11g1034 139 PANTHER ALPHABET, ISOFORM E-RELATED 56 126 - -
Vra11g1034 139 Pfam Protein phosphatase 2C 59 126 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1034 Vra-Chr11 9406790 9412115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1034 56 131 PP2C-type Phosphatase Gene Family AT4G31750 77.632 2.94e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1034 K17506 - vra:106777899 169.088