Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0988 ATGAGCGTTCCTCCGCCGTCTACGGCGGCGATGTGGACGCCGTTCACGGCGGCCCAGTGGCACGAGCTGGAGCACCAGGCTCTCATCTTCAAGTACCTCAAGGCGGGGCTCTCCGTTCCGCCCGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTCATGGCACACCCATCTCTTGGGGGGTACTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCTCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCTTCTGCTTCTTCAAACCCTGTTGCTGCTTCTGCTTCTGCTGCTTCCTCTGCAACGGGTTCTGCTACTTCTTCTGCAACTGGTTCTGCTGCTGCATCTGCGTCAACCCTCAACACCCTTCCTTTGCATACCAATGGTGCCCGGGAGGGTTTCACTTTCACCCTTGGGAACAGCGCCACCACTGCCACCCCCACACTCCCCCACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAACACCAAGAAAACTTACCGGTTTGGACTGAACTCAGAAGCAGATGAGCACGTCTTACAGAAAGATCTGGGAAGTGTGAGATATCAAGGTTATGACTTCACCTCAGACAGCATGTGGTCTCATATGTCTCCAATTCCATCAAGTACTGTTTCGGAATCGAGAAGTGGTTCTACCATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCGGAGCTGTTGAACCTTGAAACTGCAAGGACCAAAGACCTTATATTTAGTAGCCAGTTAAGTTCAGGAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCGTCTGCCATCGAGTATAGACCCAACAAGGATTTTAACTGCAATCCAGATGCCAATGTTGATTAA 1005 0.5174 MSVPPPSTAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMAHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSASSNPVAASASAASSATGSATSSATGSAAASASTLNTLPLHTNGAREGFTFTLGNSATTATPTLPHLHMDPLTLSGDNTKKTYRFGLNSEADEHVLQKDLGSVRYQGYDFTSDSMWSHMSPIPSSTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLIFSSQLSSGGSLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPNKDFNCNPDANVD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0988 334 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Vra11g0988 334 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra11g0988 334 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra11g0988 334 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra11g0988 334 Pfam WRC 69 111 IPR014977 -
Vra11g0988 334 MobiDBLite consensus disorder prediction 68 124 - -
Vra11g0988 334 PANTHER GROWTH-REGULATING FACTOR 1 334 - -
Vra11g0988 334 PANTHER - 1 334 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vra11g0988 334 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0988 Vra-Chr11 8775609 8779128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0988 14 111 GRF Transcription Factor Family AT3G13960 59.633 7.10e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vra11g0988 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0988 - - gmx:100809947 533.872