Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0979 ATGACCGGACAATCTAGGAAGTGGATGGTCCTGGTGGCGACCATCTGGATTCAGGCCTTCACCGGCACAAACTTCGACTTCTCCGACTACTCCTCTTCCCTCAAATCCCTTCTCAACATCTCTCAGATCAAACTCAACTACCTCGCCACCGCCAACGACATGGGCAAGGTCTTCGGCTGGTCCTCCGGCCTCGCCCTCACTCGTCTCCCGCTCTCCGTCGTCATCTTCATCGCCTCCGCCATGGGACTCCTCGGCTACGGCCTACAGTGGCTCGCCATCAAAAATCTCATCTCCTTGCCTTATTACCTGTTCTTTCTTCTGAGTTTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGCTTTGTTCTCTGCATTAGGAATTTTCCAGTGAACAGACCCCTTGCATTGTCACTCACAGTGAGTTTCAATGGTTTGAGTGCTGCACTCTACACACTTGCGGCCAATTCAATAGACCCTTCATCTGATTCACTCTACCTTCTCTTGAACGCCCTTGTGCCTCTTCTCACTTCCCTTGCAGCACTAATCCCAATTCTTCTTCAACCTCCTTTAGACTCTCTCTCTAGATCTGCAGATGCTGCTCGCAGAAACTCAGTGATATTTCTAGTACTAAACTTTCTCGCCATTTTCACTGGAATTTACCTCCTCCTTTTTGCCTCATCAACTTCTGACGAAGCCACCTCGAGGATCTACTTTGGTGGGGCCATTTTTTTCCTCGTATCCCCACTATGCATCCCTGGCACCATCTATGCTCGAGGTTGGTTTCACAATGCCATCCATTCCAGCTTTCAGGTGGAAGGCTCTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTCCTCTCCCGTCAGAACAGTACTCTCAATCTCAGCAATGGAGATGATCACGGCCTGTTGGGTGAGAATGGATCCGTGCATGGAGGTCAGAGGGCAAAAACCAGTGACGTGGGCTGTGACAAGGTGCTTGGTCAGGATCAGTTGGCAATGCTAGGAGAAGAGCACACCGCTGCAGAGGTAGTACAGAGGGTGGATTTCTGGCTCTATTATATTGCATACTTCTGTGGTGGCACAATTGGTCTTGTCTACAGCAACAATCTGGGACAGATAGCTCAATCTTTAGGCCTGAGTTCAAGTATATCTACCCTTGTCACTCTGTACTCATCATTTTCTTTCTTTGGTCGCTTGCTTTCAGCTGTACCTGACTACATTCGAAACAAGTTCTACTTTGCAAGAACCGGATGGCTAGCCATTGGGCTTTTCCCAACCCCAGTTGCATTTACATTGCTTGCTGTATCAGACAGTGAAGCTGCACTTAAAGTTAGCACTGCACTGATTGGTCTGAGTTCCGGTTTCATCTTCGCAGCAGCAGTGGCAGTTACATCGGAACTATTTGGACCCAACAGTGTGAGTGTCAATCACAACATTCTCATAACGAACATTCCAATTGGGTCTCTTCTGTATGGTTTGCTGGCTGCAGCGATCTACGATGCCAATGCTTACTCAGTCACAGGTGATACACTGGTGTGCATGGGAAGGAAGTGCTACTTTTGGACATTTGTGTGGTGGGGAGGAATGTCTGTCCTAGGACTAGCTTCTAGTGTGCTGTTGTTCTTGAGAACCAAACACGCCTATGATCATTTTGAGAGACATCGTTCGAGGATTTCGGTGCAGTAA 1710 0.4807 MTGQSRKWMVLVATIWIQAFTGTNFDFSDYSSSLKSLLNISQIKLNYLATANDMGKVFGWSSGLALTRLPLSVVIFIASAMGLLGYGLQWLAIKNLISLPYYLFFLLSLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGLSAALYTLAANSIDPSSDSLYLLLNALVPLLTSLAALIPILLQPPLDSLSRSADAARRNSVIFLVLNFLAIFTGIYLLLFASSTSDEATSRIYFGGAIFFLVSPLCIPGTIYARGWFHNAIHSSFQVEGSGFILVHVDDLELHKELLSRQNSTLNLSNGDDHGLLGENGSVHGGQRAKTSDVGCDKVLGQDQLAMLGEEHTAAEVVQRVDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGLSSSISTLVTLYSSFSFFGRLLSAVPDYIRNKFYFARTGWLAIGLFPTPVAFTLLAVSDSEAALKVSTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGLLAAAIYDANAYSVTGDTLVCMGRKCYFWTFVWWGGMSVLGLASSVLLFLRTKHAYDHFERHRSRISVQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0979 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 567 - -
Vra11g0979 569 Pfam Nodulin-like 7 254 IPR010658 -
Vra11g0979 569 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 567 - -
Vra11g0979 569 Gene3D MFS general substrate transporter like domains 350 560 IPR036259 -
Vra11g0979 569 SUPERFAMILY MFS general substrate transporter 6 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0979 Vra-Chr11 8625524 8629939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0979 1 563 Nodulin-like Gene Family AT1G31470 56.942 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0979 - - gmx:100814771 961.059