Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0969 ATGTTCGGTGGCGGAGGGGAGGACGCGTTGGCGGCGCGGCTTGGCATGGTGACGCCGTCGCTGATGAACCCCGCGACGTCGTTGGTCATGTCCGGGGAGGTGTCAGTGGCGGTGAGGGAGGAGAGGGGACCCGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGTGCGGAGCTGGAGAGGGACTTCACTGCGTCCAAGCGGAACAAGACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCATAGCAGGCAATGTCCATTTTTTGAAGAATTGCATGCAGTATTTACCCAAAGGGCACATAATATGCAACGGTTGCTTCTTGAATCTGAAACTCGCTCAGCTCAAACTAAGAAAGGAGTGAAAAGATCAAGTGGAGATCGATCTTCAGAGGAACTCTCAGAAGATGACGACGAGGTTGAATATGACAGCGAAGAGGAAAAACCTTCTAGAAGCAATACCCGCAAAAGGAAAGTTGACAAAGTTGGAACGGATAAAACTTCAAGGGCAAACAATCCAACGAATGCCGTCAATAGTAGTATTCAGGAAATGCTAAAGGAATTTTTCCAGCACCAGTTAAGGATGGAAATGCAGTGGAGGGAGATGATGGAGAGACGTGCTCATGAAAGACAGTTGTTTGAACAGGAGTGGAGGCAGTCGATGGAGAAGCTTGAGCGGGAGAGGTTAATTATTGAACAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCGGAAAAAAGGGACGCTTTATTGACGACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 918 0.4956 MFGGGGEDALAARLGMVTPSLMNPATSLVMSGEVSVAVREERGPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDDDEVEYDSEEEKPSRSNTRKRKVDKVGTDKTSRANNPTNAVNSSIQEMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLIIEQAWREREEQRRMREESRAEKRDALLTTLLNKLINESN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0969 305 Coils Coil 250 270 - -
Vra11g0969 305 Gene3D - 49 110 - -
Vra11g0969 305 Pfam Myb/SANT-like DNA-binding domain 47 130 IPR044822 -
Vra11g0969 305 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Vra11g0969 305 PANTHER - 46 303 - -
Vra11g0969 305 MobiDBLite consensus disorder prediction 144 212 - -
Vra11g0969 305 CDD GT1 47 112 - -
Vra11g0969 305 PANTHER - 46 303 - -
Vra11g0969 305 SMART sant 45 107 IPR001005 -
Vra11g0969 305 MobiDBLite consensus disorder prediction 151 166 - -
Vra11g0969 305 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0969 Vra-Chr11 8546014 8548437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0969 43 300 Trihelix Transcription Factor Family AT2G38250 46.183 9.20e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra11g0969 Myb_DNA-bind_4 5.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0969 - - gmx:100812635 503.442