Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0947 ATGTGTTTTTGGTGTTTTATATTTACGGCAACTCATAAACTGTCCAGCAACCTCACCGCAATCCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATGACAAATCATGCTGTGAAGGATTGGCTGCAGAAACTCACAGATGCAGCATATGTATTGGATGATATCTTGGATGAATGTTCAATTCACTTTGCAAAGATGCACTCTGATGATGGACATACTTCATGCCTATCTCGTCTCCATCCTAATGACATTCTCTTTCGTTTCAATATTTGCAAGAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATGAAGAAAAGAGCACGTTTAATTTAGAACCTGGTCTCACAGAAGTGGTGCAAAGAGTGGATGATGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTGTAGTTTATGGCAGAAACAAGGATCGAGAACAAATTGTGAAGTTTCTTCTGGAAGACGCTAATAACCGTGAAGAGCTCTCTATCTTTCCTATACTTGGTATGGGTGGACTTGGAAAAACAACATTAGCCAAGCAGGTTTTCAATGATCACAGGGTATGCAAACATTTTGACTTGACAATTTGGGTTTGTGTTTCTGATGATTTCAACACCATGACAATACTACAATCCATCTTAGAATGCATCACCGGACAAAATCCCAATCTCAATAGCTTAGAAGCAATGCGGAAAAAGGTTGAAGAAGTGTTGCATGGGAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGGAGCAGTTGAAGGGAAAGTTGCAGTGTGCAAGAGCAGCAAAAGGATCTACCATTTTAGTCACTACTCGACTCGAGGAAGTTGCTTCCATCATGCAGACGCATCCTGCTTACCATTTGAAAGAATTGCCAGGAGACGAAAGTTGGTCGTTGTTCAAATACCATGCGTTTGGACCAAACCGAGAAGAAACGGAAGAGCTCGTGGCAATTGGCAAAGAAATTGTGAGAAACTGCATTGGTTTGCCGCTTGCAATAAAAACACTGGGAAGCCTCTTGCGTGATCAAAGTGAGGTAAGACAATGGATAAATGTAAAGGAAAGTAGTTCTATGACAGATGAGGATAATTCTATTATGCGTGCTTTGAAACTTAGCTATTCTAATTTGGAGTTGTCATTGCGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGACAAGGAAGAATTGATTTATCTCTGGATAGCTAATGGATTTATTGAAAGTGAAAGAAACACAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAATAAATTATACCGTAGATCATTTTTTCAGGAAGCAAAGTGTGATGAGTTTGGTATGGTAAAAAGTTTCAAGATGCATGATCTATTTCATGATCTTGCCCAGTCTATTATGGGTGAAGAATGTGCGGCTGTTGTGGAAGGAAGGTTGACTCCGTTATCAAGTAGGGTTCACTATTTATCTTCTAATGTTTCTTATCGAGGATTCATGCATGCTTTCAAGAAAGTTGAATCCCTGCGGACTTTTCTTGATTTGCGGACTTCTATTTATAATTTTTGCCCGGTGCCATCAAACCATTCTCTCCGAGCATTATGCACAAAATCTTCTTTATTGTCCCCACTCAAGGATTTAACACATTTGAGATATTTGAGTTTGACTTGTCATTCTAAAGCAAGCTTAAATAACTTTATTTGTCAAATGCCGAAATTGCAAATTTTGAAATTGAAATCTTCCGCTATTAGGGGACTGCCCAAAAACTTGACGCAATTACAAGATCTAAGACATATCGTGATAGATGATTATGATTCAGTAGTAGAGACGCTTCCCAAAATTAGCAAGTTAAGGCATCTAAGAACACTAAGCATTTTCGTGGTGGGTTCAAAGCCAGGGTGTGGCTTAGCAGAGTTGCATAGCTTAAATCTGGGAGGCAGGCTAAGAATCATAGGCCTTGAGAACGTCCCGAATGAATGGGATGCTAAAGAAGCAAATTTGATTGGTAAGAAGGAGTTGAATATCCTACACTTGTCATGGGATGGTAATGCTAATCCAAAAGGTAGTAATGTAAGTGTGGAGAGAGTACTGGAAGCCCTAGAACCTCCCTCAACTCTCAAGAGTTTTCAAATGTATGGATATCAGGGAAGGCAGATATCGAGTTGGATGAGAAATAAAGCAGTTTTGAGAGACTTGGTGGATGTTAGACTCTCCAACTTTCGGAACTGTGAGGAGCTTCCCCCACTTGGTAAACTACCACACTTGAAAAGGATAAATGTGAGAGGAATGAAAAATGTGAAGTGGATAGATGGTGAGACGTATGACGGCGTGGAGGAGAAGGCATTTCCATCGTTGGAGGAAGTGAGAATGGATAATTTACCAAATTTGGAGAGGTTGTTGAAAGATGAAGGAGTAGAGATGCTCCCTCGTCTTTCCCAATTAACAATTAAAGATGTGTTGAACTTTAAAGTCCCACATCTTCCTTGTGTTGAGAAACTTGAGGCTAGAGGAATAGAGGCAGGGGCTTCTTTCATAGAAGGGGTTGGAGAGAATATGGCTTGTCTAGAGACCTTGATCATTAAAATCATTAAAGGAGTGGTGGTATTACCCGACGAATTCAGGAGGTTGGGTGCACTGCAGGAACTATACATTGCAGAATGGTATGATGTGGAGTATTTTCCAGAACACGTGCTGGAAGGCCTAACTTCTCTTCGAATTTTGACCATTGAAAACTGTAAGAAATTGAAATCCTTGTCTGAAGGTGTGCGACATTTTGCTTGTCTTGAGAGTTTGAGGATCAGTAAATGTCCAGAGCTGGTGGCTCTACCAAGCAATATGAGTCAACTATCTGCCCTGCGGGTGTTTTCAATTTATTATTGCTGCACATTACCAGATGGCTTACAACGTGTCCCCTCCCTACGACTTTTAGTTATATTCGGTTGCACGTGTACTTCATTGCCGGACTGGCTGGGGGACATGACTACTCTTGAACAATTAACCATTGCGTATTGTAATGAGTTGAGGTCACTTCCAAGTAGCATTCAACGCCTCACCAACTTGTCTTATTTATTTATACAAGGATGTCCTGATCTGAAGAAGCGGTGCAAGAGGGAAACAGGAGAGGATTGGCAATACATAAACCACATTCCAAAGATAGACCTATGGTAA 3189 0.4055 MCFWCFIFTATHKLSSNLTAIRAVLRDAERKQMTNHAVKDWLQKLTDAAYVLDDILDECSIHFAKMHSDDGHTSCLSRLHPNDILFRFNICKRMKDITQRFHDIHEEKSTFNLEPGLTEVVQRVDDDWRQTSSDITEPVVYGRNKDREQIVKFLLEDANNREELSIFPILGMGGLGKTTLAKQVFNDHRVCKHFDLTIWVCVSDDFNTMTILQSILECITGQNPNLNSLEAMRKKVEEVLHGKRYLLVLDDVWNEDQEKWEQLKGKLQCARAAKGSTILVTTRLEEVASIMQTHPAYHLKELPGDESWSLFKYHAFGPNREETEELVAIGKEIVRNCIGLPLAIKTLGSLLRDQSEVRQWINVKESSSMTDEDNSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIDKEELIYLWIANGFIESERNTEVEDVGNKVWNKLYRRSFFQEAKCDEFGMVKSFKMHDLFHDLAQSIMGEECAAVVEGRLTPLSSRVHYLSSNVSYRGFMHAFKKVESLRTFLDLRTSIYNFCPVPSNHSLRALCTKSSLLSPLKDLTHLRYLSLTCHSKASLNNFICQMPKLQILKLKSSAIRGLPKNLTQLQDLRHIVIDDYDSVVETLPKISKLRHLRTLSIFVVGSKPGCGLAELHSLNLGGRLRIIGLENVPNEWDAKEANLIGKKELNILHLSWDGNANPKGSNVSVERVLEALEPPSTLKSFQMYGYQGRQISSWMRNKAVLRDLVDVRLSNFRNCEELPPLGKLPHLKRINVRGMKNVKWIDGETYDGVEEKAFPSLEEVRMDNLPNLERLLKDEGVEMLPRLSQLTIKDVLNFKVPHLPCVEKLEARGIEAGASFIEGVGENMACLETLIIKIIKGVVVLPDEFRRLGALQELYIAEWYDVEYFPEHVLEGLTSLRILTIENCKKLKSLSEGVRHFACLESLRISKCPELVALPSNMSQLSALRVFSIYYCCTLPDGLQRVPSLRLLVIFGCTCTSLPDWLGDMTTLEQLTIAYCNELRSLPSSIQRLTNLSYLFIQGCPDLKKRCKRETGEDWQYINHIPKIDLW* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0947 1062 Pfam NB-ARC domain 145 386 IPR002182 GO:0043531
Vra11g0947 1062 PANTHER DISEASE RESISTANCE PROTEIN RP 11 954 IPR044974 GO:0006952
Vra11g0947 1062 PANTHER OS08G0543100 PROTEIN 11 954 - -
Vra11g0947 1062 Pfam Rx N-terminal domain 12 69 IPR041118 -
Vra11g0947 1062 Gene3D - 302 388 IPR042197 -
Vra11g0947 1062 SUPERFAMILY L domain-like 462 825 - -
Vra11g0947 1062 SUPERFAMILY RNI-like 834 1039 - -
Vra11g0947 1062 Gene3D Ribonuclease Inhibitor 829 969 IPR032675 -
Vra11g0947 1062 Gene3D Ribonuclease Inhibitor 493 828 IPR032675 -
Vra11g0947 1062 PRINTS Disease resistance protein signature 166 181 - -
Vra11g0947 1062 PRINTS Disease resistance protein signature 239 253 - -
Vra11g0947 1062 PRINTS Disease resistance protein signature 337 351 - -
Vra11g0947 1062 PRINTS Disease resistance protein signature 906 922 - -
Vra11g0947 1062 Gene3D - 128 296 IPR027417 -
Vra11g0947 1062 Gene3D - 9 102 - -
Vra11g0947 1062 CDD RX-CC_like 13 98 IPR038005 -
Vra11g0947 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 398 IPR027417 -
Vra11g0947 1062 Gene3D Ribonuclease Inhibitor 970 1046 IPR032675 -
Vra11g0947 1062 Gene3D - 390 473 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0947 Vra-Chr11 8288415 8292936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0947 905 1043 WRKY Transcription Factor Family AT4G12020 28.966 1.74e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0947 - - vra:106776709 1536.93