Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0937 ATGGCTGACGCTTTGCTGGGAATTGTGTTTCAAGACTTGCAATCTGTTGTTCAAAGCCAACTTGCAACCTATTGGGGTATTGATCAACAGGCACAAAAGCTTTCCAGCAATCTTACGGCAATTCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATAGCAAGCCATGCTGTGAAGGATTGGCTACAGAAACTCACAGATGCAGCATATGTGCTTGACGATATATTGGATGAATGTTCGATTCACTCCAGAGAGGTGCTGTCTGATGATGGGCATACTTCATGCTTAGCCCGTGCACATCCTAAGGACATTCTCTTCCGTTTTCATATTGGAAAGAGGATGAAAAATATCAACCAAAGATTTCACGACATCAATGAAGAAAGACGCATGTTTGAATTACGTGATGGTGTTACAGAGAAGCCAACAGTAGATGATGGTGAGGATGATCAAACTACCTCTGTTATAACCGAACCCATATTCTGTGGCAGAGACGAGGATCGAGAGAAAGTTGTGAAGGTTCTCCTAGAAGCTAATAACGATAAAGACCTCACCGTCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACCCTTGCCAAGCATGTCTTCCATGACCACAGAGTATGCGAACATTTTGACTTGACAATTTGGGTGTATGTTTCTGTTGATTTCAATGTGAAGGCAATACTGCAATCTATCATAGAGTATGCCACTGGACAAAACCCCAATCTCCATTCTTTAGAAACAATGCGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGATATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAACATTTGGAGGGGATGTTGCGGTTTGCAAGGGGAGCAAAAGGAGCTACCNTTTTGGTCACNACTCGACTCGAGGAAGTTGCTTCCATCATGCAGACGCATCCAGCTTACCATTTGANAGAATTGTCAGAATATGACAGTTGGTCATTGTTCAAAAGCTATGCGTTTGGACCAAACAGAGAAGAGAAGGAAGAGCTTATGGCAATCGGTGAAGATATTGTAAAAAAATGTGTTGGTTCGCCACTTGCAATCAAAACTCTGGGAAGCCTATTGCGTGATCAAACTGCGGTAACACAATGGGAAAATATAAAGGAAAGTGAGATTTGGGATATACGGAGTGAAAGTAGTTCTATGACGGGTAAGGAAAATTCTATCATGCGTGCTTTGAAATTAAGCTATTTTAATTTGGAGTTGTCATTGCGGAGATGCTTTTCTTTCTGCGCAATATTCCCCAAAGGTTTTGAAATTGTCAAGGAAGAACTAATTCATCTATGGATGGCTAATGGATTTATTAAATCTGAAGGAAATGTAGAAGTGGAGGAAGTCGCCAATAATGTGTGGAGAAAATTATACCGTAGGTCATTCTTTCAAGAAGCAAAGTCTGACAAGTTTGGTATGATTACAAGTTGTAAGATACATGATCTATTTTACGATCTTGCCAAGTCTATTATGGGTGAAGAGTGTGTGATGGTTGAGGAAGGAAGGTTGACTCAAGTGTCAACTAGAGTTCACCATTTACACTTCTTAAGCTATAATATGTCTGTCGATGTAGCTGCTTTCAAGAAAGTTGAATCTCTGCGGACTTTTCTTTTCGGTAATACTAGGCAGTTGCCGTCAAACCGTTTTCTGCGAGCATTATGTATAAGATCTTCTATGTTGCCTCCATTGAATGATTTAGCACATTTGAGATACTTGAGTGTGCATGATAGCTCGGTGAGAAATTTGAATGATTCAATTTGTCAACTGTCGAAATTGCAAATATTGAAACTGGAGTCTTGCTTTGATTTTTACGAGATACCTAAAAAGTTAACACAACTACAGGATCTAAGACATATTTTGATTAATAAGTGTGCTTCAGTACCAGATATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACATTAAGCCTTTTCGACGCGGGTTCAACACCTGGGTATGGGTTGACAGAGTTAAGTGGCTTAAGGCTGGGAGGCAAGCTGCATATCAGAGGACTTGGGAATGTGAGCGACGAATGGGATGCTAAAGAAGCAAATTTGAAGAGCAAGAAGGAGTTGAATCGCCTATACTTGTCATGGGGTGGTGGTGCTAATTCAGAAGGGAATAATGTTAGTGCAGAGAGAGTACTGGAAGCCTTGGAAGCTCCCTCGACTCTGAAGGGTTTTGGGATGGAAGGATATCAGGGAAGAAAGTTACCGAGTTGGATGAGAAGTGTTGTAGTTCTGAAAGACTTGGTGGAAATTATACTCTTTGACTGTAACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACACCTGAAAAGGGTACACGTGCGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAATCGTATGAAGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGAAATTGAGTGTAGAGAATTTACCAAAGTTGGAAAGGATGTTGAGGGATGAAGGAGTAGAGATGATCCCTCATCTTTCCCAATTAACAATTGATGGTGTCTTCAACTTTAAAGTCCCACATCTTCCTTGTGTTGAGGAGCTTCATGCTACAAGAATTGTAGCAGCGACTTCCTTCATTGAAGGGGTTGGGGATAACATGGTTTGTCTAAAGACTCTGCGTGTTAGCTTGATTAAAGGACTGAAGGTACTACCGGACCAACTAAGAAGGCTGGGTGCCCTGGAGTACCTTCGCATTGGATTTTGGTATGATTTGGAGCATTTTCCAGAACATGTATTGGAAGGTTTGACCTCTCTTCGAGGTTTGAGCATTTCTAACTGTGAGAATTTAAAATCCTTGCCTGAAGGTGTGAGACATTTGACATGTCTTCGGCGTTTGAGTATCGACAATTGTCCAAAGCTGGTAGCTCTACCAAGCAATATGAGCAAACTAACTTCCCTTCGGACTGTCTATATGGATGATTGCTCTACATTACCATATGGCTTACAATTTGTCCCCTCCCTACGAACTTTGGATATAGAAAGATACATGTCTACTTCATTGCCAGACTGGATGGGGGAGATGACTTCTCTTCAAGAATTAACCATTTTGGATTGTGGGGAGTTGAGGTCACTGCCGAGTAGTATTCAACGCCTCACCAACTTGTCTTATTTAACTATACACGGATGTCCTCATCTGAGGAAGCGATGTGTGGGGGGTGAAGATTGGCAATACATAAACCACATTCCACAAATAGAACTGGACTCCTATTCACTCCCAGAGGAAAAGACTTTAACAATAAGTGGTGAGAGTATCCGCCGATTATCTTGCTCATGGAACTGCTTCAAGCCTGCTAGACAGCCTGCCAAAGGAGTGGTAAGTAGCAATTCATTTGATCGTGTACTTGAAGAGTAA 3405 0.4164 MADALLGIVFQDLQSVVQSQLATYWGIDQQAQKLSSNLTAIRAVLRDAERKQIASHAVKDWLQKLTDAAYVLDDILDECSIHSREVLSDDGHTSCLARAHPKDILFRFHIGKRMKNINQRFHDINEERRMFELRDGVTEKPTVDDGEDDQTTSVITEPIFCGRDEDREKVVKVLLEANNDKDLTVYPIVGMGGLGKTTLAKHVFHDHRVCEHFDLTIWVYVSVDFNVKAILQSIIEYATGQNPNLHSLETMRKKVEEVLQSKRYLLVLDDVWNEDQEKWKHLEGMLRFARGAKGATXLVTTRLEEVASIMQTHPAYHLXELSEYDSWSLFKSYAFGPNREEKEELMAIGEDIVKKCVGSPLAIKTLGSLLRDQTAVTQWENIKESEIWDIRSESSSMTGKENSIMRALKLSYFNLELSLRRCFSFCAIFPKGFEIVKEELIHLWMANGFIKSEGNVEVEEVANNVWRKLYRRSFFQEAKSDKFGMITSCKIHDLFYDLAKSIMGEECVMVEEGRLTQVSTRVHHLHFLSYNMSVDVAAFKKVESLRTFLFGNTRQLPSNRFLRALCIRSSMLPPLNDLAHLRYLSVHDSSVRNLNDSICQLSKLQILKLESCFDFYEIPKKLTQLQDLRHILINKCASVPDMPPNIGKLRHLRTLSLFDAGSTPGYGLTELSGLRLGGKLHIRGLGNVSDEWDAKEANLKSKKELNRLYLSWGGGANSEGNNVSAERVLEALEAPSTLKGFGMEGYQGRKLPSWMRSVVVLKDLVEIILFDCNNCEELPPLGKLPHLKRVHVRGMKNVKWIDGESYEGVEEKAFPSLEKLSVENLPKLERMLRDEGVEMIPHLSQLTIDGVFNFKVPHLPCVEELHATRIVAATSFIEGVGDNMVCLKTLRVSLIKGLKVLPDQLRRLGALEYLRIGFWYDLEHFPEHVLEGLTSLRGLSISNCENLKSLPEGVRHLTCLRRLSIDNCPKLVALPSNMSKLTSLRTVYMDDCSTLPYGLQFVPSLRTLDIERYMSTSLPDWMGEMTSLQELTILDCGELRSLPSSIQRLTNLSYLTIHGCPHLRKRCVGGEDWQYINHIPQIELDSYSLPEEKTLTISGESIRRLSCSWNCFKPARQPAKGVVSSNSFDRVLEE* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0937 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 426 IPR027417 -
Vra11g0937 1134 Gene3D Ribonuclease Inhibitor 856 992 IPR032675 -
Vra11g0937 1134 Gene3D - 418 501 IPR036388 -
Vra11g0937 1134 PANTHER DISEASE RESISTANCE PROTEIN RP 886 988 IPR044974 GO:0006952
Vra11g0937 1134 PANTHER DISEASE RESISTANCE PROTEIN RP 24 849 IPR044974 GO:0006952
Vra11g0937 1134 PANTHER OS10G0130600 PROTEIN 886 988 - -
Vra11g0937 1134 PANTHER OS10G0130600 PROTEIN 24 849 - -
Vra11g0937 1134 SUPERFAMILY L domain-like 476 911 - -
Vra11g0937 1134 CDD RX-CC_like 2 126 IPR038005 -
Vra11g0937 1134 Gene3D - 6 124 - -
Vra11g0937 1134 Pfam NB-ARC domain 165 412 IPR002182 GO:0043531
Vra11g0937 1134 Pfam Rx N-terminal domain 6 84 IPR041118 -
Vra11g0937 1134 Coils Coil 31 51 - -
Vra11g0937 1134 Gene3D Ribonuclease Inhibitor 520 855 IPR032675 -
Vra11g0937 1134 SUPERFAMILY RNI-like 843 1065 - -
Vra11g0937 1134 Gene3D Ribonuclease Inhibitor 993 1069 IPR032675 -
Vra11g0937 1134 Gene3D - 147 315 IPR027417 -
Vra11g0937 1134 Gene3D - 320 416 IPR042197 -
Vra11g0937 1134 PRINTS Disease resistance protein signature 185 200 - -
Vra11g0937 1134 PRINTS Disease resistance protein signature 258 272 - -
Vra11g0937 1134 PRINTS Disease resistance protein signature 356 370 - -
Vra11g0937 1134 PRINTS Disease resistance protein signature 931 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0937 Vra-Chr11 8146580 8150066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0937 182 745 WRKY Transcription Factor Family AT5G45050 23.163 1.64e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0937 - - pvu:PHAVU_002G130100g 1609.35