Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0929 ATGGCTTGGAACAGTTGCGATGGAATTTCCGTGAGGCGAAGTGAACCGGAGCTGGTGGTGGCGGCAAAAGCTACTCGAAGTGAAGTAAAGCATCTTTCGGACATTGATGACCACGAAGGGCTTCGCATGCACCTCTCCTTCATCATGTTCTATAAAAGGGAGGAGGCGATGAAGGAGTTTGATCCTGTGATGATCATAAAAAGGGGAATATCTGAAGCTCTTGTTCACTACTATCCCTTGGCTGGGAGGGTGGCGGAAGGGCCTAACAGAAAGCTGGTGGTGGAGTGCAGCGGTGAGGGGGTTATGTTTGTTGAAGCTCAGGCTGATGTTGCATTGGAGGAGCTCGGTGACTCAATTGGACCACCTTGTCTCCATAGGAAACACTTCCTCTATCAACTGCCTGCATCTCAAGGAATTCTTGCCTCTCCTTTGTTGTTTTTTCAGGTAACTCGTCTTTCATGCGGAGGGTTCGTATTTGCCGTGTGCATGAATCACGTCGTGTGCGACTCTTTCGGGCTGGTTCAGTTCCTCAACACGGTGGCAACAATGGCAAGGGATCCACACGCCGCAATCCAACAACCGGTGTGGAGAAGAGACATATTTAGCGCACGCAACCCTCCTCGTGTAACATGCACACACCACGAGTTCGAGGATGTTGTCCACCATAGTACTACAACTACTTCATCTTCACACGAAGACTTGTCTCACGAATCATTTTTGTTTGGGAAGAAAGAGATTGAAACGCTTCGTAATCATCTTCCTCAGAACCTTCAGAAATGCTCAACTGTCGAGTTACTTACGGCATGCTTATGGAAGTGTCGTACAATGGCGCTTGATCTTGACCCGAACGAGGTGGTTGGTGTGTCGAGTTTCGTCACTACTCATGGGAAGGTGGATGTGCCAAAAGGGTATTATGGGAATGCGTTTGTGTTTCCAATGGCACTGTCAAAGGCTGGTTTGCTGTGCGAAAACTCTTTAGGGTATGCTTTGGGGTTGATCAGAGAAGCCAAGGGTCGAATGAGTGAAGAGTACGTTAGGTCAATGGTTGATCTTATGGTTCTGAAGGGGCGTCCTATGTATAGGACACATGGGAGTTTCTTTGTAGGGGATATGACTCGTGTGGGTTTTGATGAAGTTGATTTTGGTTGGGGAAAGCCCGTTTATGGAGGCCCTGTTGGAGCCATACCATTATCCAGCTACCTTGCAAGGTTCAAAAATGGGATTATGGTGCCAATATTGTTGCCACAGCTTGTCATGAAAAGGTTTCTCCGGGAGCTCACCAAAATGACTAGTGAAGAGGAGTTTAATCTCAGTCCCGACATCAAAACAAGACCCAGATCCATGATATAA 1350 0.4763 MAWNSCDGISVRRSEPELVVAAKATRSEVKHLSDIDDHEGLRMHLSFIMFYKREEAMKEFDPVMIIKRGISEALVHYYPLAGRVAEGPNRKLVVECSGEGVMFVEAQADVALEELGDSIGPPCLHRKHFLYQLPASQGILASPLLFFQVTRLSCGGFVFAVCMNHVVCDSFGLVQFLNTVATMARDPHAAIQQPVWRRDIFSARNPPRVTCTHHEFEDVVHHSTTTTSSSHEDLSHESFLFGKKEIETLRNHLPQNLQKCSTVELLTACLWKCRTMALDLDPNEVVGVSSFVTTHGKVDVPKGYYGNAFVFPMALSKAGLLCENSLGYALGLIREAKGRMSEEYVRSMVDLMVLKGRPMYRTHGSFFVGDMTRVGFDEVDFGWGKPVYGGPVGAIPLSSYLARFKNGIMVPILLPQLVMKRFLRELTKMTSEEEFNLSPDIKTRPRSMI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0929 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 430 - -
Vra11g0929 449 Gene3D - 216 425 IPR023213 -
Vra11g0929 449 PANTHER LOW QUALITY PROTEIN: METHANOL O-ANTHRANILOYLTRANSFERASE-LIKE 9 430 - -
Vra11g0929 449 Gene3D - 6 215 IPR023213 -
Vra11g0929 449 Pfam Transferase family 11 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0929 Vra-Chr11 8063322 8066280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0929 42 396 Monolignol Biosynthesis Gene Families AT5G48930 29.380 8.66e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0929 - K19861 vun:114173108 784.637