Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0928 ATGATTGTGCAGGTAACCCGATTAACATGCGGAGGATTTGTTTTCGCTGCTCGCATGAACCACACAATCTTTGATTCATTGGGGTTGGTGCAATTTCTGACCATGGTGGGTGAGATTGCAAGAGGTGCTTCCATAACCCAGTTTCCTGTGTGGCAAAGAGAGCTATTCAGTGCAAGGAACCCACCAAGAATCACATGTTCACACAACGAATATGAAATCCAACATTGCCAGAAAGAAACATGGGACACCCACGAAATGGACCATGGATCATTTTTCTTTGGTCCCAAAGAGATTGCAACCCTTCGGAGTCACCTTCCCATGCACCTCAAAAATTCTTCAACTTTTGAGGTGCTCTCTGCCTGTTTGTGGAAATGTCGAACCATAGCACTTGGGCTCAAACCCAACGAGAGTGTTGGCTTGTCACCCTTTATCACTGGTCGTGGCAAATTGGGCCTGCAAGTGCCCAATGGGTACTATGGCAATGCCTTTGCCTTCCCAATGGCTCTAGCCAGGGCTGGGCCTTTGTGCCAAAACCCATTGGGGTATGCATTGGAGTTAGTAAAAAAGGCAAAGGCTCAAATGGGTGCAGAATATGTCAGTTCTGTGGCTGATCTTATGGTTCTAAAGGGTCGACCCATGTATAGGACTGAAGGGAACTACCTTATTGGGGACACTACTCATGTGGGGTTCTATGAAGTGGATTTTGGGTGGGGGAGTCCTATATATGGAGGACCTGCTGGGGCTATACCTTTTGTTAGCTTCTATGGACGTTTTAGGAACAGTGAAGGAGAGGATGTAATTGTGGTGCCAATTTTGTTGCCACACCATGTTATGAGGAGGTTTCTCTCTGAACTGGTAAAGATCACAAACAAGGACCCTATGGACTTTTCTGATGAGAATATGCCAAATAGGTCCATGTTGTAA 924 0.461 MIVQVTRLTCGGFVFAARMNHTIFDSLGLVQFLTMVGEIARGASITQFPVWQRELFSARNPPRITCSHNEYEIQHCQKETWDTHEMDHGSFFFGPKEIATLRSHLPMHLKNSSTFEVLSACLWKCRTIALGLKPNESVGLSPFITGRGKLGLQVPNGYYGNAFAFPMALARAGPLCQNPLGYALELVKKAKAQMGAEYVSSVADLMVLKGRPMYRTEGNYLIGDTTHVGFYEVDFGWGSPIYGGPAGAIPFVSFYGRFRNSEGEDVIVVPILLPHHVMRRFLSELVKITNKDPMDFSDENMPNRSML* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0928 307 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 289 - -
Vra11g0928 307 Pfam Transferase family 2 283 - -
Vra11g0928 307 PANTHER LOW QUALITY PROTEIN: METHANOL O-ANTHRANILOYLTRANSFERASE-LIKE 1 289 - -
Vra11g0928 307 Gene3D - 1 68 IPR023213 -
Vra11g0928 307 Gene3D - 69 283 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0928 Vra-Chr11 8059613 8060632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0928 1 288 Monolignol Biosynthesis Gene Families AT5G48930 27.063 3.44e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0928 - - vra:106776703 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0928 11 8059613 8060632 Vra11g0928 11 8059613 8060632 ECH