Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0926 ATGAAGCATGTTTTTCTTCTGTTACTTGTTCAACTGTTTTCTGTCTTTACATTAAGCTCACTGTATTTTATCCCAACTGTGACTGCCTTTGCATCAGGAAATGAGACTGATCATTTGGGTCTGCTGGAATTCAAGAAATCCATATCAGGAGACCCATATGGAATCTTACTTTCTTGGAATACTTCTACTCACTTTTGTGACTGGTCTGGAATAACATGCAATCTCAAGCTTCAAAGAGTTACACAGTTAGTTTTGTCAAGGTACAAGTTGGAGGGATCCATATCTCCCCACATAGGAAATCTCTCTTATATGATCAATTTCAATCTATCAGTCAACAACATCAATGGGAAAATACCACAGGAACTGGGAAGGTTGTCACGTCTGCAACAACTATCTCTCGGAAACAACTTATTGGGAGGAGAAATTCCTACAAACTTGACTGGATGTAATGATCTCAGATTCTTATACTTACAGAGAAATAATCTTACTGGCAGAATACCTATCGAGATTGGCTCACTTCAAAAGCTTGAATGGTTGGCTATTTCTACTAACAAGTTAACAGGAGAAATCCCTTCTTTCATAGGTAATCTTACATCCCTCACAGATATCGATGTTGGTGGTAACAACTTTGAAGGACATATACCACAGGAAATATGCCATCTCAAAAACTTGACATTTGCATCATTTGGTCAAAACAAATTCACTGGAACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACCATGATCTCAGCTACAGGAAATCAGTTAAGTGGCTCTCTTCCACCTAACATGTTTCACACCCTCCCATATCTTCAAGAATTTTACATTGGTGAAAATCAAATCACTGGTCGAATCCCACCTTCCATCACCAATGCATCCGCATTCTTTTTAGCACTTGAGGCCAGTCGAAACAGTCTCACTGGACAAATTCCAAGCATGGGGAAGTTCCAATATCTTGATATCATATCTCTGTCTTGGAACCATCTAGGAGACAATTCAACTACTGATTTCGATTTTCTAGAATCATTGGCTAACAGTAGTAAGTTGAAACTTCTGTCCATATCCTACAATAATTTTGGAGGTCATTTGCCAAACTCTTTGGGAAATTTATCCCCCCAGCTTGATAGATTATATCTTGGAGGTAATCAGATATCAGGGAAAATCCCTGCAACAATAGGAAATTTGACTAACTTAACTTTTTTGGCTATGGAAAACAACAATCTCGGTGGGAATATCCCAACAACTTTTGTGAAGTTTCAAAAAATGCAGAAGTTAAATTTAGGTTCAAACAAACTGTCAGGAGAGTTAGGAGCCCACATAGGCAACCTTACTCAATTGTTTGATTTGAAATTAGGAGATAATTTGTTTGAAGGGAACATTCCTCCAAGTATAGGAAACTGTCAGAAGTTACAGTACTTAGACATTTCACGTAACAACCTTACAGGAACCATACCCTTGGACCTTTTTAAGCTTTCATCTCTAACCATCTTGTTGAATTTGTCACTAAACTCATTAAGTGGCAGTATACCTGAAGAAGTAGGTAGCCTAACAAATCTTGGTTGGCTAGATATGTCTGAGAATCACATGTCCGGAGAAATTCCTCCAACAATGGGAGAATGCATAATGTTGGAATACCTATATTTGCAAGGGAATTCTTTACAAGGAACCATACCATCTTCTTTGGCATCACTCAAAGGGCTTCAACATTTAGACCTGTCACGAAATCAATTGTCTGGATCTATTCCTAATGATCTACAAAATATTTCTTCCTTAAAATATTTCAATGCATCCTTCAACACATTAGAGGGTGAAGTACCAACCAAAGGTGTCTTTGGAAATGTAAGTGCCATACTGGTTATGGGAAATAATAAACTTTGTGGGGGAACTTCAGAACTGCATCTACCACCATGTCCTGTCAAAGGTAAGAAACTTGCAAAACACCACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGTGATTGTTTTTCTTCTCATATTGTCAATTACTCTAACTATTTACTGGACAAGGAAAAGGAGTAATAAAACATCTTTGGATTCACATTCATCAGAAACTGATCATCAGTTGGCTACAGTTTCGTTCCAAAGCCTGCACAATGCAACTGATGGATTCTCAGCTACAAACTTGATAGGGTCTGGAAATTTTAGCTCTGTTTACAAAGGAACTCTTGAGGAGTTAGAAGAAAAAGTTGTTGCCATAAAGGTCCTAGACCTTCAGAGAAAGGGAGCTCACAAGAGTTTTGTTTCAGAATGCAACGCACTCAGAAATATCAAACATCGAAATCTGATTCAGGTTTTGACATGTTGTTCCAGCATAGATTACAATGGTCAAGAATTCAAAGCTCTAATTTTTCCTTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCCAAGACACCAAGTGCAGAGCAAAAGAGAAAATTGAGCCTTGATCAAAGATTAAATATCATGGTGGATGTTGCTTCTGCATTACATTATCTTCACCATGAATGTGAGCAACCAATAATTCACTGTGATTTAAAGCCTAGTAATGTCCTCCTCGACAATGAGATGGTTCCTCGTGTGAGTGATTTTGGCATAGCAAAACTTCTCTCAACCATCAATGATACCACTTCTAAACAAACAAGTACAATTGGAATAAAGGGAACTATTGGCTATATTCCTCCAGAGTATGGAGTGAGCTCTGAAGTATCAACTTACGGTGACATATACAGCTTTGGGATTCTTGTGCTGGAAATGCTCACAGGAAAAAGTCCCACAGATGAAATGTTTGAAGATGGTCAAAATCTTCATAACTTTGTTACAGTTTCATTTCCTGATAATCTTTTGCAAATTTTGGATCCACTACTTGTTCCAACAGAGGAAGCAGCACCATTGAAAGGAAACGATTGGAATCTTGATCCAAATGTTGAGATGTGCTTAGTTTCCCTTTTCAGGATTGGGATTTCTTGCTCTATGAAATCACCAAAAGATAGAATGAATATTTCTGATGTCACTAGGGAGCTCAACCGAATCAGTGTGGAAACATCAAAGTAG 3063 0.3787 MKHVFLLLLVQLFSVFTLSSLYFIPTVTAFASGNETDHLGLLEFKKSISGDPYGILLSWNTSTHFCDWSGITCNLKLQRVTQLVLSRYKLEGSISPHIGNLSYMINFNLSVNNINGKIPQELGRLSRLQQLSLGNNLLGGEIPTNLTGCNDLRFLYLQRNNLTGRIPIEIGSLQKLEWLAISTNKLTGEIPSFIGNLTSLTDIDVGGNNFEGHIPQEICHLKNLTFASFGQNKFTGTFPSCLYNMSSLTMISATGNQLSGSLPPNMFHTLPYLQEFYIGENQITGRIPPSITNASAFFLALEASRNSLTGQIPSMGKFQYLDIISLSWNHLGDNSTTDFDFLESLANSSKLKLLSISYNNFGGHLPNSLGNLSPQLDRLYLGGNQISGKIPATIGNLTNLTFLAMENNNLGGNIPTTFVKFQKMQKLNLGSNKLSGELGAHIGNLTQLFDLKLGDNLFEGNIPPSIGNCQKLQYLDISRNNLTGTIPLDLFKLSSLTILLNLSLNSLSGSIPEEVGSLTNLGWLDMSENHMSGEIPPTMGECIMLEYLYLQGNSLQGTIPSSLASLKGLQHLDLSRNQLSGSIPNDLQNISSLKYFNASFNTLEGEVPTKGVFGNVSAILVMGNNKLCGGTSELHLPPCPVKGKKLAKHHKFRLIAVIVSVIVFLLILSITLTIYWTRKRSNKTSLDSHSSETDHQLATVSFQSLHNATDGFSATNLIGSGNFSSVYKGTLEELEEKVVAIKVLDLQRKGAHKSFVSECNALRNIKHRNLIQVLTCCSSIDYNGQEFKALIFPYMTNGSLEQWLHPKTPSAEQKRKLSLDQRLNIMVDVASALHYLHHECEQPIIHCDLKPSNVLLDNEMVPRVSDFGIAKLLSTINDTTSKQTSTIGIKGTIGYIPPEYGVSSEVSTYGDIYSFGILVLEMLTGKSPTDEMFEDGQNLHNFVTVSFPDNLLQILDPLLVPTEEAAPLKGNDWNLDPNVEMCLVSLFRIGISCSMKSPKDRMNISDVTRELNRISVETSK* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0926 1020 Gene3D Ribonuclease Inhibitor 189 245 IPR032675 -
Vra11g0926 1020 Gene3D Ribonuclease Inhibitor 246 316 IPR032675 -
Vra11g0926 1020 Gene3D Phosphorylase Kinase; domain 1 672 794 - -
Vra11g0926 1020 SMART serkin_6 712 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0926 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Vra11g0926 1020 Pfam Leucine Rich Repeat 350 372 IPR001611 GO:0005515
Vra11g0926 1020 Pfam Leucine Rich Repeat 471 490 IPR001611 GO:0005515
Vra11g0926 1020 CDD STKc_IRAK 718 1014 - -
Vra11g0926 1020 PANTHER LRR RECEPTOR-LIKE KINASE 22 1007 - -
Vra11g0926 1020 ProSiteProfiles Protein kinase domain profile. 712 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0926 1020 Pfam Leucine rich repeat 545 603 IPR001611 GO:0005515
Vra11g0926 1020 Gene3D Transferase(Phosphotransferase) domain 1 795 1020 - -
Vra11g0926 1020 PANTHER OS04G0122200 PROTEIN 22 1007 - -
Vra11g0926 1020 Gene3D Ribonuclease Inhibitor 317 640 IPR032675 -
Vra11g0926 1020 SUPERFAMILY Protein kinase-like (PK-like) 693 1011 IPR011009 -
Vra11g0926 1020 SMART LRR_typ_2 470 493 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 518 542 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 397 420 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 566 589 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 197 221 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 445 469 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 245 269 IPR003591 -
Vra11g0926 1020 SMART LRR_typ_2 125 149 IPR003591 -
Vra11g0926 1020 Pfam Protein kinase domain 715 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0926 1020 Gene3D Ribonuclease Inhibitor 34 188 IPR032675 -
Vra11g0926 1020 SUPERFAMILY L domain-like 35 331 - -
Vra11g0926 1020 PRINTS Leucine-rich repeat signature 472 485 - -
Vra11g0926 1020 PRINTS Leucine-rich repeat signature 566 579 - -
Vra11g0926 1020 SUPERFAMILY L domain-like 349 629 - -
Vra11g0926 1020 ProSitePatterns Protein kinases ATP-binding region signature. 718 742 IPR017441 GO:0005524
Vra11g0926 1020 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0926 Vra-Chr11 8029929 8033558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0926 34 1011 Receptor kinase-like Gene Family AT3G47570 44.726 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vra11g0926 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0926 - - gmx:102664380 1468.37