Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0917 ATGGAACTAACCACAATCTTATGCTTCTCTTGTGTTACCTTTCTCTTCCTTCTTTTTCTCTTCAGGACACTCATCAACCCCTTTGTCTCCAAACGCCATGACTTACCACTCCCACCTGGGACCATGGGCTGGCCTTATATAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCTCCAAAATCAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTCGGATGTCCCTGTGTGATGATTTCCAGCTCCGAGGCTGCCAAGTTTGTGCTCAACAAAGCTCAGCTGTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTTGTTCTTCGCACCTTCATGCCAGAAGCTATAAAAAACATCGTTCCAGACATTGAATCCATTGCCCAAGATTGCTTAAAATCCTGGGAAGGCCGCTTGATCACTACTTTCCTTGAAATGAAAACGTTCACCTTCAACGTTGCCCTGCTTTCAATTTTCGGGAAAGAAGAGATTCTGTACAGAGATGCTCTGAAACGGTGCTACTACACTCTGGAACAAGGGTACAATTCAATGCCCATTAACGTTCCGGGGACACTGTTCCACAAGGCGATGAAAGCGAGAAAGGAGCTTGCACAGATCTTGGCCCAAATAATCTCAAGCAGGAGGCAGAGGAAACAGGATTACAAGGACTTGTTGGGTTCGTTCATGGGAGAGAAAGCAGGGCTCACCGACGAGCAAATAGCAGATAATGTAATTGGCGTCATTTTTGCAGCTCGTGATACCACGGCCAGTGTGCTGACGTGGATTGTCAAGTACCTTGGAGAAAACCCCAGTGTCCTAGAAGCTGTTACTGAGGAGCAAGAGTGCATATTGAAGAGCAAGGAAGAAAGTGGAGAGGATAAGGGTCTGAATTGGGAAGATACCAAAAAGATGCCAATAACTTCAAGGGTTATTCAGGAAACACTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAGGCAGTAGAAGACGTTGAATATCAAGGGTATCTCATACCAAAAGGGTGGAAAGTGCTACCTCTATTTAGGAACATTCACCACAGTCCAGAAAACTTCAAGGAGCCAGAAAAATTTGACCCCTCAAGATTTGAGGCTGCACCAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCAGGGAATGAACTGGCCAAGTTGGAGATTTTGGTCCTCTTACATCATCTCACCACAAAGTTCAGGTGGTCTGTTGTGGATGCAATGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGTTTACCCATCACACTATATCCCAAGAAGAAGAAGTAG 1407 0.4463 MELTTILCFSCVTFLFLLFLFRTLINPFVSKRHDLPLPPGTMGWPYIGETFQMYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSSEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDCLKSWEGRLITTFLEMKTFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQILAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKSKEESGEDKGLNWEDTKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPEKFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEILVLLHHLTTKFRWSVVDAMNGIQYGPFALPQNGLPITLYPKKKK* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0917 468 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 463 - -
Vra11g0917 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vra11g0917 468 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 Gene3D Cytochrome P450 28 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 Pfam Cytochrome P450 38 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0917 468 PANTHER CYTOCHROME P450 26 13 463 - -
Vra11g0917 468 SUPERFAMILY Cytochrome P450 31 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0917 Vra-Chr11 7889832 7892603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0917 1 460 Cytochrome P450 AT4G19230 71.645 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0917 K09843 - gmx:100170674 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0917 11 7889832 7892603 Vra11g0917 11 7889832 7892603 ECH
Vra11g0917 11 7889832 7892603 Vra7g0300 7 4637437 4640094 PCT